Caballeronia sp. SBC2: SBC2_00840
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Entry
SBC2_00840 CDS
T06459
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00300
Lysine biosynthesis
caba00470
D-Amino acid metabolism
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
caba01120
Microbial metabolism in diverse environments
caba01230
Biosynthesis of amino acids
Module
caba_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SBC2_00840 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBC2_00840 (dapF)
Enzymes [BR:
caba01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SBC2_00840 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QIE22076
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Position
complement(95643..96560)
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AA seq
305 aa
AA seq
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MPLLRVTYNSVMKLEFTKMHGAGNDFVVLDGYSKPLSLSGAQVRALADRHFGVGADQLLL
VEKPDIEGVDFKYRIYNCDGGEVEHCGNGARCFVKFVRDRGLTSKTSVRVQVHHGVIVLT
MQENGDVVVDMGRPEFEPALVPFSAEGLQGRNEGADTLWPLDVQGETRWISVVSMGNPHA
VQIVADVENSPVLIEGPVIEHHARFPKRVNAGFMQIVNRGAVKLRVFERGAGETLACGTG
ACAAVAAGIRRGLLDSPVQVQTHGGVLTIAWEGAHNTVAPLFMAGPATTVFEGEIELDPT
LAHAD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgctgcgcgtcacttacaatagcgtcatgaaactcgaattcaccaaaatgcat
ggcgcgggcaacgactttgtcgtgctcgacggctactccaaaccgctctcgctgagcgga
gcccaggtgcgcgcgcttgcggaccggcatttcggcgtcggcgcggatcagttgctgctg
gtcgaaaaaccagacattgaaggcgttgatttcaaataccgcatctacaattgcgacggc
ggcgaagtggagcattgcggcaacggcgcgcgctgctttgtgaagtttgtgcgcgaccgt
ggcctcaccagcaagacgagtgttcgggtgcaggtacatcacggcgtgatcgtgctgacc
atgcaggagaacggcgacgtggtggtggacatgggccgtcctgagtttgaacctgccttg
gtgccattcagcgctgaaggattgcaaggccgcaacgaaggcgccgacaccctctggccg
ctcgacgtacaaggtgaaacgcgctggatctcggtggtatccatggggaatccgcacgcc
gtacagatcgtggccgacgtggaaaattcacccgtgctgatcgaaggaccggtgatcgaa
catcacgcgcgctttccgaagcgagtgaacgcgggattcatgcagatcgtgaatcgtggc
gcggtgaagctgcgtgttttcgaacgtggcgcgggcgagacgctggcgtgcggcaccggt
gcatgcgcagcggttgcggcgggtatccggcgcggactgctcgactcgccggtgcaggtc
cagactcacgggggcgtgctgaccattgcctgggaaggcgcgcacaacaccgtggccccg
ctcttcatggccggccccgccaccaccgtattcgaaggcgagatcgagcttgatcccacg
ctcgctcacgccgactga
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