Caballeronia sp. SBC2: SBC2_02540
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Entry
SBC2_02540 CDS
T06459
Symbol
gcvA_1
Name
(GenBank) Glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_02540 (gcvA_1)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SBC2_02540 (gcvA_1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QIE22245
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Position
complement(276098..277078)
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AA seq
326 aa
AA seq
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MDLRQLPALNALRAFEAAARHESFSRAADELFVTHGAVSHQIRALEADLGVTLFARDGKR
VRLSDIGRQYATEVRATLSALAEATRRLRSGERDRRLVVSMLSSFSARWVTPRIGGFIEE
HPEINLELLSTNTLTDFTRDDVDVAIRFSSLGKYAGLHSEELLDEVFFPACSPNFCGGKL
PRTPADMADAPLLRSHDELWKPWFDAAGLVDCPEPKRGVLYEDSSNLLQAAIQGQGIALV
RRSLAMHEIVAGRLVRLFNIDGPSPWNYYFVCPPALLGTQRVQVFRTWLFDEIARFKQLY
ECTPAACDAPMQPLAAEPQLKLKVPL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtggacctccgacaactccccgccctcaacgcgctgcgcgccttcgaagccgccgctcgt
cacgaaagcttttcacgcgccgccgacgaactcttcgtcacccatggcgccgtcagccac
cagatccgtgcgctcgaagcggatctcggcgtcacgctcttcgctcgcgacggtaaacgc
gtacgcctgtcggacatcggccgccaatacgccaccgaggttcgcgccacgctttccgcc
ctcgctgaagccacgcgtcgcctgcgctcgggtgaacgggaccggcggctggtggtgtca
atgttgtcgtcgttttcggcacgctgggtgacgccgcggatcggcgggtttatcgaagag
catccggaaatcaacctggaactgctctcaaccaacacacttaccgatttcacccgcgac
gacgtggacgtcgccatccgattcagcagcctgggcaaatatgccggattgcactcggaa
gaattgctcgatgaagtgtttttcccagcgtgttcgccgaatttttgcggtggcaaactg
ccccgcacgcccgccgacatggccgacgcgcctctgctgcgctcgcacgacgaactctgg
aaaccgtggttcgatgcagccgggctcgtggactgtcctgagccaaagcgcggggtttta
tacgaggattcgtcgaatttgctgcaggcggccattcaaggccagggaattgcgctcgtg
cgccggtcgcttgccatgcatgaaatcgtggcgggccggctcgtgcggctgttcaatatt
gacgggccgagcccgtggaactactacttcgtctgcccgcccgcgttgctgggaacgcaa
cgcgtgcaggtctttcgcacttggctcttcgacgaaatcgcacgcttcaagcaactctac
gagtgcacgccggctgcctgcgatgcacctatgcagccactcgcggccgagcctcaactc
aagctcaaagtaccactttga
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