Caballeronia sp. SBC2: SBC2_03870
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Entry
SBC2_03870 CDS
T06459
Symbol
fadN
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00071
Fatty acid degradation
caba00362
Benzoate degradation
caba00650
Butanoate metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
caba01212
Fatty acid metabolism
Module
caba_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SBC2_03870 (fadN)
09103 Lipid metabolism
00071 Fatty acid degradation
SBC2_03870 (fadN)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SBC2_03870 (fadN)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SBC2_03870 (fadN)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Shikimate_DH
ApbA
Motif
Other DBs
NCBI-ProteinID:
QIE22377
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All DBs
Position
419171..421606
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AA seq
811 aa
AA seq
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MSNLNIRKVAVLGAGVMGAQIAAHLINAQVPVLLFDLPAKEGPKNGIALKAIENLKKLSP
APFGVKDDAQYIQPANYDDDIEKLKECDLVIEAIAERMDWKHDLYKKVSPYIGAKAIFAT
NTSGLSITELSKGFSDALKARFCGVHFFNPPRYMHLVELIPTDTTRPEILDQLETFLTSV
VGKGVVRAKDTPNFIANRVGVFSILAVIAEAEKFGLRFDEVDDLTGARLGRAKSATFRTA
DVVGLDTMAHVIKTMQDNLPDDPFFALYETPAVLAGLVKNGALGQKSGAGFYKKEGKAIK
VLDPKTGTYVDGGGKADELVGRILKRPPAERLKLLRESQHPQAQFLWSIFRDVFHYIGVH
LESVADNARDIDLAIRWGFGWNEGPFEGWQAAGWTQVAQWVKEDIDAGKALSKAPLPSWV
FDGPVAEKGGVHTAEGSWSPAASKFIPRSSLDVYKKQVFRAPLIGEAGVDPKTYGKTLFE
TDAVRAWVDDRAGEDDVVIVSFKSKMNTIGPAVIEGLTKAIELAEADYKGVVIWQTSALK
LGNPGGAFSAGANLEEAMPAFMMGGAKGIEPFVKTFQQGMLRVKYASVPVVAAVSGIALG
GGCELALHSAKRVAHIESYMGLVEVGVGLVPAGGGLKEAALRAASAASAVNATSDLLKFL
QKSFENAAMAKVSASALEARAMGYLKASDTIVFNVHELLDIAKKEARALSAAGYRAPLRA
VQIPVAGRSAISTIKASLVNMRDGRFISDHDFLIASRIAEAVCGGDVEAGSLVDEEWLLA
LERRAFVDLLGTAKTQERIMGMLQTGKPVRN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatctgaacatacgcaaggtggccgtactcggtgccggcgtgatgggcgcgcag
atcgctgcgcacctgatcaacgcccaggtgccagtcctgctgttcgacctgccggctaaa
gaaggcccgaagaacggcatcgcgttgaaagcgatcgagaatctgaagaagctgtcgccc
gcgccgttcggcgtgaaggacgacgcgcaatacatccagcccgcgaactacgatgacgac
atcgagaagctgaaagagtgcgatctcgtgatcgaagcgatcgccgagcgcatggactgg
aagcacgacttgtacaagaaggtgtcgccgtatattggtgcaaaggcgattttcgcgacc
aatacgtcggggctgtcgatcacggagttgtcgaagggtttctccgatgcactcaaggcg
cgtttctgcggcgtgcactttttcaatccgccgcgctacatgcacttggtcgaactgatc
ccgaccgatacaacgcggccggagattctcgatcaacttgaaacgttcctgacgagcgtg
gttggcaagggcgtcgtgcgggcgaaggacacgccgaatttcatcgcgaatcgcgtgggc
gtgttttcgattctcgcggtaatcgcggaagcagagaagttcggactgcgtttcgatgaa
gtcgatgacctgaccggcgcccgtctgggccgcgcaaaatcggcgacgttccgcacggcc
gatgtggtcggtctggacaccatggcgcacgtcatcaagacgatgcaggacaacttgccg
gacgatcctttcttcgcgttgtatgaaacgccggccgtgctcgctggtttggtgaagaac
ggcgctttgggacaaaagtcgggcgcggggttctacaagaaggaaggtaaagcaatcaag
gtgctggacccgaagacgggcacatacgttgatggcggcggcaaggcggatgaacttgtc
ggccgtatcctgaagcgtccgccggctgaacgcctgaagctgttgcgcgaatcgcagcat
ccgcaagctcagttcctgtggtccattttccgcgatgtgttccattacatcggcgtgcat
ctcgagtccgttgcagacaatgcccgcgatatcgatctcgccatccgctggggtttcggc
tggaacgaaggtccgttcgaaggctggcaagcggctggctggacgcaggtggcgcaatgg
gtgaaggaagatatcgatgcaggcaaggcgttgtcgaaagcgccgttgccttcatgggta
ttcgacggtcccgtggccgagaagggcggcgtgcataccgctgaaggatcgtggtcgcct
gcagcttctaaattcattccgcgttcatcgcttgatgtctacaagaagcaggttttccgc
gcaccgttgatcggtgaagcgggcgtcgatccgaaaacctacggcaagacgctgttcgaa
accgacgccgtgcgcgcctgggtcgatgaccgcgcgggcgaagacgatgtcgtgatcgtc
tcgttcaagagcaagatgaacacgattggaccggcggtgatcgaaggtttgacgaaagcg
atcgaactcgccgaagccgattacaagggcgtcgtgatctggcaaacgtccgcgttgaag
ctcggcaatccgggcggcgcgttctcggccggtgcgaacctcgaagaagccatgcccgcg
ttcatgatgggcggcgcgaagggtatcgaaccgttcgttaagacgttccagcaaggcatg
ttgcgcgtgaagtacgcgagtgtgccggtggtggccgctgtatcgggcatcgcgctcggc
ggcggttgcgaacttgcactgcattcggccaagcgtgttgcgcatatcgaaagctatatg
ggactcgtggaagtgggcgtgggtctcgtgcccgcaggcggtggtctgaaggaagcggcg
ttgcgtgcagcaagcgctgccagtgccgtgaacgcgaccagcgatcttttgaaattcctg
cagaaatcgtttgaaaacgccgcgatggcgaaggtctcggcatcggcgctggaagcacgc
gcgatgggttatctgaaggcatcggacacgatcgttttcaacgtgcacgaattgctcgat
atcgcgaagaaggaagcgcgggctttgagcgctgctggttatcgtgcgccgttgcgggcc
gtgcaaatccccgtggcaggacgctcggcgatctcgacgatcaaggcgtcgctcgtgaat
atgcgcgacggccgcttcatcagtgaccacgatttcctgatcgcgagccgtatcgcggaa
gccgtgtgcggcggtgacgtggaagcaggcagtctggtcgatgaagaatggctgctggcg
ctggagcgtcgcgcgtttgtcgacctgctcggcaccgcgaagacgcaagaacggatcatg
ggcatgttgcagaccggcaagccggttcgtaactaa
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