Caballeronia sp. SBC2: SBC2_04010
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Entry
SBC2_04010 CDS
T06459
Symbol
yjiE_1
Name
(GenBank) HTH-type transcriptional regulator YjiE
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_04010 (yjiE_1)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SBC2_04010 (yjiE_1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QIE22391
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Position
440343..441311
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AA seq
322 aa
AA seq
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MELKWLEDFVSLAETRSFSRSAELRHITQPAFSRRIQALEAWLGTDLIDRSVYPTRLTQA
GQVFYEQALAMLSQFHEARTLLRGQTGVPDATIDFAVPHTLSLTYFPRWLHHIEARLGRI
NTRLRALNVHDAVLSLVEGGCDLVMGYHHPSHPMALDPARYDMLTLGTEPISPFSSVNKG
GRARYTLPATADAPAPYLSYTPNAYLGRMTEVIIATSPARLYLDKVYETDMAEGLKAMAL
AGHGVAFLPHSAVAKEVDEGSLIRLDRGTRGTPAGQFTLTMEIRLYRDKMASKGDDPRQA
LMRNLWEAVGEEVSRPAETPAT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaatggctcgaagatttcgtctcgcttgcggagacgcgcagtttcagccgc
tcggctgaactgaggcacattacacagccagctttctcgcgccgcatccaggcgctcgaa
gcgtggctgggcacggatcttatcgaccgctccgtctacccgacccgcctcacccaagcg
ggccaagttttctacgagcaggcgctcgcgatgctttcgcagttccacgaagcgcgcacg
ctattgcgcggacaaactggcgtgcccgatgcgaccatcgacttcgcggttccgcacacg
ctctcgctgacctatttcccgcgctggctacaccatatagaagcgcggcttgggcgcatc
aacacgcgtttgcgcgcgctgaacgtgcatgacgccgtgttgtcgctggtggaaggcggc
tgcgatctggtgatgggttatcaccatccgagccatccaatggcgcttgatcccgcccgc
tacgacatgctgacgctcggcaccgaacccatcagcccgttttcatcggtgaacaagggc
ggccgcgcgcgctacacgttgcccgctaccgccgacgcccccgcgccgtatctctcgtac
acgcctaacgcttatctcggccggatgacggaggtgataatcgcgacctcaccggcacgt
ctttatctcgacaaggtctacgaaaccgacatggccgaaggtctcaaggcaatggcgctg
gccggtcatggcgtggctttcctgccgcacagcgcagtggccaaggaagtcgatgaaggc
agtttgatccggctcgaccggggaacccgtggaacaccggcgggtcagttcacgctcacg
atggaaatccgtttgtaccgcgacaaaatggcatcgaagggagacgacccgcggcaggca
ttaatgcgtaatctttgggaagcagtaggcgaagaggtatcgaggccagcggaaacccct
gccacatga
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