Caballeronia sp. SBC2: SBC2_04220
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Entry
SBC2_04220 CDS
T06459
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBC2_04220 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_04220 (ruvB)
Enzymes [BR:
caba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBC2_04220 (ruvB)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBC2_04220 (ruvB)
RecFOR pathway proteins
SBC2_04220 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
TIP49
nSTAND3
Rad17
AAA_22
AAA_3
AAA_14
AAA_18
DUF815
NTPase_1
TsaE
RNA_helicase
AAA_17
AAA_28
IstB_IS21
Sigma54_activ_2
ABC_tran
bpMoxR
AAA_33
NB-ARC
NACHT
AAA_24
AAA_25
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QIE22412
LinkDB
All DBs
Position
complement(460249..461313)
Genome browser
AA seq
354 aa
AA seq
DB search
MIETDKLAAERIISATPVSPNEEVFERALRPRDLEEYVGQEKIRDQLQIFIEAARRRSEA
LDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEKNDVLFIDE
IHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDR
FGIVSRLEFYTASELARIVTRSASLLKAHIVPEGALEIAKRARGTPRIANRLLRRVRDYA
EVRADGNITAEVADAALKMLDVDPVGFDLMDRKLLEAILHKFDGGPVGVDNLAAAIGEER
DTIEDVLEPYLIQQGYLQRTPRGRVATLLTYRHFGLAAPDAGPIRELWDANADS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaccgacaaactcgccgccgaacgcatcatttcggctactcccgtctcgccg
aacgaggaagtgttcgagcgcgcgctgcggccgcgcgatctcgaggaatacgtcgggcag
gagaagatccgggatcagcttcagattttcatcgaggcagcgcggcggcgctccgaagcg
ctcgatcacgtgctgttgttcgggccgccgggtcttggcaagaccacgctcgcgcacatc
attgcgcgggagatgggcgtgaatctgcggcagacgtcgggaccggtactggagcgcgcc
ggcgatctcgcggcgctactgacgaacctcgaaaagaacgatgtgcttttcatcgacgaa
attcatcggctgtcgccggtcgtcgaggaaatcctgtatccggcgctcgaggattatcag
atcgacatcatgatcggtgaaggtccggcggcccgtagcgtcaagctggatttacagccg
ttcacgctggtcggcgcgaccacgcgggccggcatgctgaccaatccgttacgcgatcgc
ttcggcattgtgtcgcggctggagttctacaccgcgagcgaactcgcgcgaatcgtgacg
cgctcggcgtcgctgctcaaggcgcatatcgtcccggaaggggcgttggagattgcgaag
cgggcgcgcgggacaccgcgaatcgcgaaccggctgctgcggcgcgtgcgagattacgcc
gaagtacgggccgacggcaacatcacagccgaagtggcggatgccgcgttgaagatgctc
gacgtcgatccggttggcttcgacttgatggaccgaaaactgctggaagccatcttgcac
aaattcgatggcggtccagtcggcgtcgacaatctcgcggcagctattggtgaagaacgc
gacaccattgaagacgtgcttgaaccctatttgatccagcagggatatttgcaacgcaca
ccgcgaggacgcgttgccacgttgctaacgtatcgccactttggcctcgccgcccctgac
gccggcccgatccgcgaactgtgggacgccaacgcagacagttga
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