Caballeronia sp. SBC2: SBC2_05100
Help
Entry
SBC2_05100 CDS
T06459
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caba03019
]
SBC2_05100
03016 Transfer RNA biogenesis [BR:
caba03016
]
SBC2_05100
Enzymes [BR:
caba01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
SBC2_05100
Messenger RNA biogenesis [BR:
caba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SBC2_05100
Transfer RNA biogenesis [BR:
caba03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SBC2_05100
Prokaryotic type
SBC2_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
QIE22500
LinkDB
All DBs
Position
561477..561995
Genome browser
AA seq
172 aa
AA seq
DB search
MKRAWFCGFIVALSLVVSGCGKSGPDSHGPAANTSAGASQAESPHVLQDKDKLKSDPRAE
SWRDTASTGSEPSQTTVDAAQLPKQAIVTLRRIEAGGPFPYEKDGIVFGNRERMLPPHPR
GFYHEYTVPTPRARDRGARRIVCGGPRRQIDNCFYTDDHYVSFKRIAGLTSG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcgcatggttttgtggattcatcgtggcgctttctttggtggtaagcggctgc
gggaagagcgggccggattcccacggcccggccgcgaatacctcagcaggagcgtcgcag
gcggaatcgccgcacgtgttgcaagacaaggacaagctgaaaagcgatccgcgcgcagag
agctggcgcgataccgcatcaacgggttcggaaccgtcgcagactaccgtcgacgccgcg
caattgccgaaacaggccattgtgacgctgcggcggattgaggctggcgggccgtttccg
tatgagaaagacggcatcgtgtttggcaatcgcgagcgtatgctgccgccgcacccgcgc
ggcttttaccacgaatacaccgttcctacgccgcgcgcccgcgatcgcggcgcacgtcgg
attgtatgtggcgggccccgtcggcagatcgacaactgcttctataccgacgaccattac
gtgagttttaaacgcattgcgggattaacttcgggatga
DBGET
integrated database retrieval system
