Caballeronia sp. SBC2: SBC2_05120
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Entry
SBC2_05120 CDS
T06459
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caba03009
]
SBC2_05120 (rsmE)
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
SBC2_05120 (rsmE)
Ribosome biogenesis [BR:
caba03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SBC2_05120 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QIE22502
LinkDB
All DBs
Position
complement(562773..563510)
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AA seq
245 aa
AA seq
DB search
MPRFFVASPLVAGEIMPLPDEVVRHVHVLRLQTEDTVHLFNGLGGEYRARLVEIGKRTAT
VQLDKFTDREAEPPYRITLAQGVAGGDKMDWLIEKAVELGVTSIVPLTAERGVVRLSGER
AARRQGHWQALVQAACEQCGRNRVPDVAAPQVLDKWLGNLPPAEDGELRLLLSPRAQLGF
ASLPASAPSAPVTIAIGPEAGFSPAEEAAIVDAGFTTLGLGPRVLRTETAGMAVLAALAA
RWGGW
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtttctttgttgccagcccgctcgtcgcgggcgaaatcatgcccttgccggac
gaggtcgtccgccatgttcacgtcctgcgcctgcaaactgaggacaccgtccatctcttc
aacggcttgggcggtgaatatcgcgcgcgtctggttgaaatcggcaagcgaaccgcgacc
gtgcaactcgataaattcaccgaccgcgaagcggagccgccttatcgcatcacgctggcg
caaggcgtggcgggtggcgacaagatggactggctgatcgaaaaagcggtcgaactgggc
gtcacgtccatcgttccgctcactgccgagcgcggcgtggtgcggctatcgggcgaacgt
gcggcgcgtcggcagggacattggcaggcgttggtgcaagccgcgtgcgagcaatgcgga
agaaatcgggtgccggatgtagcggcgcctcaggtcctggataaatggctcggcaaccta
ccgcccgccgaagatggcgagttgcggctgctgctgtcgccgcgagcgcagcttgggttt
gcctctttgccagcgagcgcgcccagcgcacccgtgaccatcgcgatcgggccagaagcc
gggttttcgccggcagaggaagcggccattgtggatgccggttttaccacccttggtctc
ggacctcgcgtcttgcgcaccgagacggccggcatggccgtccttgctgcgctcgccgcg
cgctggggcgggtggtga
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