Caballeronia sp. SBC2: SBC2_10560
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Entry
SBC2_10560 CDS
T06459
Symbol
dinG
Name
(GenBank) 3'-5' exonuclease DinG
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03030
DNA replication
caba03430
Mismatch repair
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBC2_10560 (dinG)
03430 Mismatch repair
SBC2_10560 (dinG)
03440 Homologous recombination
SBC2_10560 (dinG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caba03032
]
SBC2_10560 (dinG)
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_10560 (dinG)
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBC2_10560 (dinG)
DNA replication proteins [BR:
caba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBC2_10560 (dinG)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBC2_10560 (dinG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Cho_C
GIY-YIG_UvrC
Rv2179c-like
GIY-YIG
DNA_pol_A_exo1
NrfD_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QIE23040
LinkDB
All DBs
Position
1161971..1163116
Genome browser
AA seq
381 aa
AA seq
DB search
MLPILTNSVSAEPLVFVDLETTGGTFGVNRITEIGVVEVGPAGVTQWSSLVNPQQPIPFF
IQQLTGISDSMVRNAPTFEAIAHDLLARLDGRLFIAHNARFDHGFLRSEFKRAGIKFQPD
VLCTVQLSRAIYPAERRHGLDALIERHALVPAARHRALADADLLWQFWQHLHRAFSADVL
HGHIEQVARRFRLAGDIDEDTIEQIPAGCGIYVFYGEDDVPLYVGRSVRLRQRVRAHLSG
PKRSAKDLRLAELVRRVEWTATGGEIGAMLAEGRSVARLRPAHNRLSKARRDDPGQAPWT
YPGAIAIEETDAATSARVWHVVDGWQYFGMASSLAEAAQLRAAVSAACFELSTYRILGER
LSRGLTIVPLAATACLSGEPV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgctcccaatccttactaatagtgttagtgcagaaccgctggttttcgtcgacctcgaa
accacgggcggcaccttcggcgtgaatcgcatcactgaaatcggcgtggtcgaggttggg
ccggctggtgtgacgcagtggagttcgctcgtcaatccgcagcagccgattccgttcttt
atccagcaacttaccggtatcagtgattcgatggtgcgcaacgcgccaacgttcgaggcc
atcgcgcatgatttgctggcccgcctcgatggacggctgtttattgcccacaacgcgcgg
ttcgatcatggcttcctgcgcagcgagttcaagcgtgccggcatcaagttccagcccgac
gtgttgtgcacggtccagttgtcgcgcgccatctacccggcggaacgtcggcatggactc
gatgcgctgatcgaacggcacgcgctcgtgcctgcggcgcgccatcgcgcacttgccgac
gccgatctgctctggcaattctggcagcacctgcaccgcgcattttccgccgatgtcctg
catggccacatagaacaggttgcccggcgtttccggcttgccggcgatattgacgaggac
accatcgaacagattccggccggctgcggcatctacgtgttttatggcgaggacgatgtg
ccgctctatgttggacgaagcgtgcgtttgcgccagcgcgtgcgtgcgcatctgtcgggt
ccgaaacggtcggcgaaggatctgcggctcgcggaactcgtccggcgggtggagtggacc
gcgacgggcggcgagatcggcgcgatgctggcagaagggcgctcggtcgcgcggttgcgc
cctgcccataaccggctgtccaaagcacgtcgcgatgacccgggccaggcgccctggacc
tatcctggcgccatcgcgatagaggaaacggacgccgcgaccagcgcgcgggtgtggcat
gtcgtcgatggctggcagtatttcggcatggcctcgtcgctcgccgaggccgcgcaattg
cgagcggcggtatccgcagcgtgtttcgagttatcgacgtatcggattctcggcgaacgt
ctgtcgcgcgggctgacaatcgtgccgcttgcagccaccgcctgcctgtcaggcgagccg
gtctag
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