Caballeronia sp. SBC2: SBC2_11310
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Entry
SBC2_11310 CDS
T06459
Name
(GenBank) Autotransporter beta-domain protein
Organism
caba
Caballeronia sp. SBC2
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Paralog
GFIT
Motif
Pfam:
Autotransporter
AC_1
BigA_3rd
Motif
Other DBs
NCBI-ProteinID:
QIE23113
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All DBs
Position
1249190..1252612
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AA seq
1140 aa
AA seq
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MRRTRLSLPSMLASRTCVLSRLSIGMACLLRAPSTLAVCDNLAPASGETATCNANAPNPS
TLPVVAVAGSTGVTVLMLPGAGISVNNSSGIVIRDSSTVQNFGTIQNTADSFDGITSAGS
ASGFGHNSVTNGGSIHTAGAASEGIYNGSAAVTMVNTASGVIGTSGTGSAAMLDLSAAGG
GKLTNHGSLTTSGDDSYGMAAETSGDALVNGGTITTTGVRSYGLFANGGAAGPGNTTLTN
NGFIDVSGSNAHGIVSLDASAGLVTNTGSIIAHGASGLGAFFAQGVTLNNTTGARIVSEQ
DNAIDANGGGTFTNAGTISGANEGLSIAGGGALIVNSGVIQGGTNLAISTIGPYAITITN
TGQIASAGGVAVWTDTGVNTFNMNGGTVTGLIRQGTGINTFVMQAGQVDSVDQGGPQPRF
TLNGGRVTGGLTNGGAVTITGGRIGSVALTAAQNTFTMSGGQIDTNLTAGSGDTNFKLSG
GAIGGAVTLGNGANTIAVTGGSIAQGLASGNGATTFGWLGGGLIGGTVSFGAGGVVATLS
NLSDANLAGLSAFDGGTGQNALTFDHTQTGGIGRFVSWDSIALTNGSRLSLDNHGVALGN
AAAQTGLFDIDSTSTLAWNGGGESAITTTAHGGRVILSNAGTIDLTGGAGQRNTLVVGGD
YVGHGGQLLVQSVLGTDSSPSGKLVISQGAATGNTSIGVTNASGSGALTLADGIMVVQAV
QGGTTAPTAFSLANPVKAGAYTYYLFRGGVAAGTEDNWYLRSSITPPPPPPVTPPPVTPP
PVTPPPVTPPPVTPPPVSPPPVSPPPVTPPPPVSPPLQADPTPLYRIEVPIYAEVSSLTR
ELGIQQIGTFQDRAGDQSQLNETGALRAAWSRVWGNRTITSSDTGVDPHFNGAIGGMQIG
QDVYANTTADGHRDHYGFLLGVARASGDVSGFALGMPAVQAGSLSIDAGSVGAYWTHIGA
GGWYTDTVVIGSTLTIKPSSNDGVSTTTHGRSIAGSIEAGLPFPLAAGLSIEPQAQVIWQ
HTGIDDLNDGISSVAFTNPNAVAARLGVRLTGRMQALGATWQPYARVNLWRYFSATSHVT
FDGTTDIPAQSSATIADIAAGVAVNLSARGSVFLSVHYATNASGARRETLGGDATVRWRW
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgaacgcgcctgtcgttgccgtccatgctggcgtctcgaacatgtgtgctatcg
cggctgtcgattggcatggcgtgcctgttgcgcgctccgtccacactcgccgtttgcgac
aacctcgcgcctgcgagcggagaaaccgccacgtgcaacgccaatgcgcccaatccttct
acgctgcccgtcgtggccgtcgcgggcagtaccggtgtcacggtcctcatgctgccaggc
gccggcatcagcgtgaacaacagcagtggcatcgttatccgcgattcgagcactgtacag
aacttcggcacgatccaaaacaccgccgactcattcgatggcatcacctccgcgggcagc
gcatccggcttcgggcataactccgtgaccaatggaggttcgattcatacggccggcgcg
gcgtcggaaggcatatacaacggctcggcagcggtcacgatggtgaatacggcgagcggc
gttattggcacgagcgggacggggtcggcggccatgctcgacttgtccgcagccggcggc
ggcaagctgaccaaccatggctcgcttaccacgtccggagacgactcttatggcatggcc
gccgaaacttctggcgacgcgctcgtcaacggcggcacgattacaaccacaggcgttcgg
tcgtatggtctgttcgcgaacgggggggcggccggaccaggcaacacaacgctgacaaat
aacggtttcatcgatgtctccggatcgaacgcgcacggcattgtgtccctcgatgcttcg
gcggggctcgtcacgaacaccggttcgatcatcgcgcatggagcgagcggactcggcgcg
tttttcgcgcagggggtgaccttgaacaacaccaccggcgctcggatcgtaagcgagcag
gacaacgccatcgacgccaacggcggtggcacgttcaccaacgccgggaccatatcgggc
gcgaacgaggggctgtccatcgccggcggcggcgcactgattgtgaacagcggggtgatt
cagggcgggactaatctcgccatctccactatcggcccgtacgccatcaccatcacgaat
accggccagatcgcgagtgcgggcggcgtggccgtgtggaccgataccggcgtgaacacc
ttcaacatgaatggcggcacggtcaccggactgatccgtcaaggcaccggcatcaatacg
tttgtcatgcaggcggggcaggtcgattccgtggatcagggcggcccccagccacgcttc
acgctgaatggcgggcgcgtgacgggagggctgacgaacggcggtgcggtcacgatcacg
ggcgggcgcattggcagcgtggcgctgacggcagctcagaacaccttcaccatgtcaggc
gggcagatcgatacgaacctgacggccggctccggtgataccaatttcaagctctcgggt
ggcgcgataggcggcgcggtcacgcttggtaacggcgcgaacactatcgcggtcacgggg
ggatcgatcgcgcagggcctcgcgtcgggcaatggcgccacgaccttcggatggctgggg
ggcggtctcattggcgggacggtgtcgttcggagcgggcggggtggtcgccactttgtcg
aatttgagtgacgctaacctcgctgggttatcggcattcgatgggggtaccggtcaaaat
gcgctgacgtttgaccatacgcaaaccggcggcattggccgttttgtgagctgggacagc
atcgcgttgacgaacggcagcaggctttcgctcgataatcacggcgtggcactgggcaat
gcggcggcgcaaacgggcctattcgatatcgattcgaccagcacgcttgcttggaacggt
ggtggcgaatcggcaatcacgacgaccgcgcacgggggccgcgtgatcttgagcaacgcg
ggcacgattgatctgactggcggcgcgggccagcgcaacacgttggtggtcggcggcgac
tatgtcggtcatggggggcaattgctggtgcagagcgtgctcggcacggatagctcgccg
agcggaaaactggtgatttcgcagggtgcggcgacgggcaatacctcgatcggggtaacg
aacgccagtggctcgggtgcgctgactttggcagatggaatcatggtcgtgcaggcagtt
cagggcgggacgacggcaccgaccgcgttttcattggcgaatccggtcaaggcaggggcg
tacacgtactacctgtttcgaggcggcgttgcagcggggacggaggataactggtatttg
cgatcgagcatcacgccaccaccgccgccacccgtgacaccgccacccgtgacaccgcca
cccgtgacaccgccgcccgtgacaccaccgcccgtgacaccaccgcccgtgtcaccaccg
cccgtgtcaccgccgcccgtgacgccgccaccccccgtgtcgccaccgctgcaggcggac
ccgacgccactctatcgaattgaggtaccgatctatgcagaggtttcatcgctgacgcgc
gaactcggcatacagcagatcggcacttttcaagaccgcgcgggcgaccaatcgcagttg
aacgagacgggtgcgctgcgtgcggcgtggagccgtgtctggggcaaccggacgatcacg
agcagcgacacaggcgtcgatccgcatttcaacggcgcgatcgggggtatgcaaattggt
caggatgtctatgccaacaccaccgccgacgggcatcgggaccactatggatttctgctc
ggcgtggcgcgcgcgtcaggcgatgtgagcggtttcgcgctcggcatgccggccgtgcag
gcgggcagcctgagtatcgatgccgggagcgtaggcgcttactggacgcatattggcgcc
ggtggctggtacaccgataccgttgtgatcgggagcacattgacgatcaaaccgtcgtcg
aacgacggcgtcagcacgaccacgcatggccggtcgatagcgggatccatcgaggccggt
ttgccgttccccttggcggcaggactgagcatcgaaccgcaggcgcaggtgatctggcag
cacacgggcatcgatgatctcaacgatggcatttcgagcgtcgccttcactaaccccaac
gccgtcgcagcccgcctcggcgtgcggttgaccgggcggatgcaggcactgggcgcgacc
tggcaaccgtacgcacgcgtgaatctctggcgctacttcagtgccacgagccatgtgacg
ttcgacggtacgaccgacatcccggcgcagtcatcggcgacgatcgccgatattgcagcc
ggcgtcgccgtgaacctgagtgcgcggggcagcgtcttcctgagcgtgcattacgcgacg
aacgcaagcggcgcgcgccgcgagacgctaggtggcgacgccaccgtgcgctggcgatgg
tga
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