Caballeronia sp. SBC2: SBC2_11800
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Entry
SBC2_11800 CDS
T06459
Name
(GenBank) Autotransporter beta-domain protein
Organism
caba
Caballeronia sp. SBC2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
QIE23161
LinkDB
All DBs
Position
1292602..1296789
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AA seq
1395 aa
AA seq
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MRASIVSARECPGGALSGSKAGHGWLDVPIDRIVRVSILILVNCIAQKARATDLDSSQTG
YILTPAGNPYNVIAGANIDTTAQGSIGIYGSSNHSATWALTNNGTVTGGYYAVEFDSPVV
LVNNGSMISRATSSIALYSGGNVTNSADATIVGRLDGIFANSATSSVTNAGDIGGSASDI
TQTQSGVHLPSGGAVTNLGTGRIAAFGPGILGNSATTVQNAGLIISFNNTAIDLSADKAG
VGSVVSNSGTITGQGGTAILFGPEDNSLILAGTSVITGIVDASAHGVSTTNTLVLGGTSL
GRFDISSLGASAQYRGFDILQKNDSGTWTLTGANGAAQTWLVSGGGVAMAGQLNGSLVAT
PGATGLDIEVASGGSISASSGSGVSVNDASRVVNSGLINSSADGAAAVVANGAGTSVFNS
GSITATGGNASGITIDASTGTASLTNEQGGSITSAAGDAVQAGSNVSIVNAGSIATTGGN
GAGIRIDASTGPTTLLNKQGGSIKSAAGVAVQAGSNVSITNAGTIAAEGANATGVVIDAS
TGSASLTNAQGGSITSVGAAAVRVGSNVSIINAGSIATTGGNGAGITIDASMGPTTLLNK
QGGSITSAGGAAVQAGSNTSITNAGTIAAEGANGTGVAIDASTGSASLTNAQGGSITSVG
AAAVRAGSNVSIINAASIAMTGGNGAGITIDASMGPTTLLNKQGGSITSAGGAAVQAGPN
VSITNAGTITAEGANGTGVAIDASTGSASLTNAQGGSITSAPGAAVQAGSNVSIYNAGTL
IGNSAAVRFTGSNNRLTLDSGSQVSGDLDGGNGSANALVLQGSGTLSSRTYGFSTFAMQG
IDWTVSSSVQTGGSSAIESGTLSLTGALTSPVITVAPGATLTGTGTLNGALTLQGVIAPG
VTSTAATTGLQPLAIGTLSVVGSYIQTAGSRYDANVSPQGIDLISVDGTATLQGGTVQAR
LRTGLFTPTDTYEIISTTAGLNGAFSGITTFNPFVLPTLVYDANNAYIHVQRGFQFAGGT
PNQIAVEAALDHGVAGIGTGALPTRDFLAVTGDLVSLEGSSAYAALDQLSAEAYTAFPNA
HFEAVRLGMDAIDSRLTAARTTGACAAGDVAALSANGERACSWISVLGSTGRAAGYDTWL
GQQTSLAGVISGVDYRIAPQLTLGAALVAVHGNTSTDTLPVHGQFDSYQAALYGSYEPGA
YWLQGTIGYARNDDQMKRSLFFTDTPRTAFGNVDGNQYFASLRNGVDLPIEKLGVFTPFV
ALEMQSVESPGFTETGADSVNLAVSGNTANSMRSLLGAQWRKDVDLLGRGWSFNGQLAWA
HQYGTQTQSIDARFEGAADSGFTVHGSGPARDMAQVGLGARVELGRQIHAFFRYDGEFGG
GGHTHAGTAGIDYRW
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcttcgatcgtgtcagcaagggaatgccctggtggtgcgttgtccggatctaaa
gcggggcatggctggctggacgttccaatcgatcgaatagttcgagtaagcattctgatc
ctggtcaattgcattgctcagaaagcgcgtgcaacggatctcgacagttctcagaccggc
tatatattgactccggctggcaacccgtacaacgtcattgccggcgcaaatattgataca
actgcgcagggcagcattgggatctacgggagctccaatcactcagccacatgggctttg
accaataacgggaccgttactgggggttactacgccgtcgagttcgatagtcccgtcgtg
cttgtcaataatggatcaatgattagccgggccacctcgtccatcgctttgtacagcggc
ggcaacgtgaccaattccgccgacgctacgattgttggccggcttgatggcatcttcgct
aatagtgcgaccagctcggtcactaatgcgggtgacattggaggctcggcatcggatatt
acgcaaactcagtcgggggttcatttgccgagtgggggagcggtgaccaatctcggcacg
ggaagaattgcggcttttggtccgggcattctcggtaattcggcgaccacggttcagaac
gccgggctgattatctctttcaacaacacggctatcgatttgtccgccgataaggcaggc
gttggcagcgtggtttccaatagcggcaccatcaccgggcaagggggcacggcaattctc
ttcggcccggaagacaatagcttgattctggcgggtacctcggtgattaccggaattgtc
gatgcgagtgcgcatggcgtatccacaaccaatacgctggttctcggcgggaccagtttg
ggccgattcgatatatcgagtctcggtgcgtccgcgcaatatcgcggcttcgatatcctg
cagaagaacgattcaggcacctggaccttgactggcgccaatggcgccgcgcagacatgg
ctcgttagcggaggcggcgttgcgatggcggggcagttgaacggtagtctcgttgcaacg
ccgggggcaacagggctcgacatcgaggtagcgtccggcggctcgatttccgcttcgtcg
ggaagcggcgtgtcggtcaatgacgcgagccgtgtcgtcaacagtggattaataaatagt
agtgcagatggtgccgccgcggtcgtcgcgaatggtgcgggaacgagcgttttcaattcg
gggtccattacggcgacgggtggcaacgcatccgggattacgatcgatgcgtcaacgggc
acagcgagcttgacgaacgagcagggcggatcgattacaagtgcagcgggcgatgctgtg
caggcgggttcgaacgtttcgatcgtcaacgcggggtccatcgcaaccacgggcgggaat
ggcgcggggattaggatcgatgcgtccacgggcccgacgacccttctgaacaaacaaggg
ggatcgatcaagagcgcagcgggcgtcgctgtccaggccggttcgaatgtgtcgatcacc
aacgcggggaccatcgcagcagaaggcgcaaacgcaacgggcgttgtgatcgatgcatca
acaggctcagcgagtctgacgaacgcgcaagggggatcgattacaagcgtaggagctgcc
gccgtacgggtcggttcgaatgtttcgatcatcaacgcggggtccattgcaaccacgggc
ggaaatggcgcggggattacgattgatgcgtccatgggtcccacgacccttctgaacaaa
caaggtggatcgatcacgagcgcgggaggcgccgccgtccaggctggctcgaatacgtca
atcacgaacgcagggaccatcgcagcggaaggcgcaaacggaacgggcgtcgcgatcgat
gcatcaacaggttcagcgagtttgacgaacgcacaagggggatcgattacaagcgtagga
gctgccgccgtacgggccggttcgaatgtttcgatcatcaacgcggcctccatcgcaatg
acgggcgggaatggcgcgggaattacgatcgatgcgtccatgggtcccacgacccttctg
aacaaacaaggtggatcgatcacgagcgcgggaggcgccgccgtccaggctggtccgaat
gtgtcgatcaccaacgcagggaccatcacagcggaaggcgcaaacggaacgggcgtcgcg
atcgatgcatcaacaggctcagcgagtctgacgaacgcacaaggcggatccatcacaagc
gcaccaggcgccgccgtacaggccggttcgaacgtctcgatctataacgccggaaccttg
atcggaaatagtgccgcggttcgttttactgggtcaaacaatcgcctgacgctcgacagt
ggcagtcaggtatcaggcgaccttgatggcggaaacggttcggcgaatgcgttggtccta
cagggttcggggacactatccagtcgtacctacggtttttccacgttcgcgatgcaaggc
attgactggacagtgtccagctccgttcagacaggaggctcgagcgcaattgaaagtggc
accttgagcctgacaggcgccttgaccagtccggtgataaccgtcgctccgggcgccacc
ctcaccggaacggggaccttgaatggtgcactcacgttacaaggcgtcattgcaccgggc
gtgacgagcaccgcagcgacaacgggtcttcagcctttggcgatcggcacactgtcagta
gtcggctcatacatccagactgccggcagccgctacgacgccaatgtctcgccacaagga
atcgatctcattagcgtcgatggcaccgcaacgctgcaaggcggcacagtacaagcgcgt
ttgcgcaccggattattcacgccaactgacacgtacgagataattagtacaactgctggt
ttaaacggcgctttctcgggcatcacaacgtttaacccattcgtcctgcccacattagtc
tacgacgcgaacaatgcctacattcacgtacagcgcggcttccagttcgctggtggcacg
ccgaaccagatagcggtcgaggcggcactcgatcacggcgtcgcaggtatcggcacgggg
gctctgcccactcgcgattttctggccgtcacgggcgatctggtgagcctcgaaggttca
tcggcttacgccgcactcgaccaactgagcgcggaagcctataccgcgttcccaaacgct
cacttcgaagccgtgcggctgggcatggacgcaatcgattcaagattgaccgcagcacgc
accacgggtgcatgtgctgcaggcgatgtggctgcattgtctgcaaacggggagcgggca
tgctcgtggatcagcgtgctcggcagcaccggcagggcagccgggtatgacacgtggctt
ggccagcaaacaagtctggctggcgtgatatccggcgtcgactatcgcattgcgcctcag
ttgacgctgggcgccgcgttggtcgctgtgcacggtaatacgtcaacggacacgctgcct
gttcacggccaattcgatagttatcaggcggcgctttacggcagttacgagccgggagct
tattggctccagggcacgattggctatgcgcgcaatgacgatcaaatgaaacgctccctc
tttttcaccgataccccgcgcacggcgtttggaaacgtcgatggaaaccagtacttcgca
tcgctacgtaacggcgtggatctgcctatagagaaacttggtgtattcacaccgttcgtg
gcgcttgaaatgcagagtgtagagagtccgggattcactgaaaccggagcagattcggtg
aatctggccgtctccgggaatacggcgaattcaatgcgctcgctactgggtgcgcaatgg
cgtaaggacgtcgatttgctcggccgcggctggagctttaacgggcaactggcctgggct
catcaatatggcacgcagacccaatcgattgacgcgcgcttcgaaggcgcagcagatagt
ggttttacggttcacggcagcggaccggcgcgagatatggcacaagtcggtcttggagca
cgagtggagttgggccggcaaattcatgctttctttcgctatgacggtgaattcggcggt
ggtggtcacacgcatgcgggaaccgcaggcatcgattaccggtggtga
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