Caballeronia sp. SBC2: SBC2_12540
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Entry
SBC2_12540 CDS
T06459
Symbol
mdtC_1
Name
(GenBank) Multidrug resistance protein MdtC
KO
K07789
multidrug efflux pump
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBC2_12540 (mdtC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_12540 (mdtC_1)
Transporters [BR:
caba02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SBC2_12540 (mdtC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QIE23235
LinkDB
All DBs
Position
complement(1388235..1391540)
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AA seq
1101 aa
AA seq
DB search
MNLSQPFIARPVATTLLAIGIALAGLFAFTKLPVAPLPQVDFPTISVQASLPGASPETVA
TSVASPLERHLGSIADVTEMTSQSSVGSARITLQFGLNRDIDGAARDVQAAINASRADLP
TALKSNPTYHKVNPADAPILILALSSPTRTAGSLYDSAATVLQQTLSTVPGVGEVDVSGS
ANPAVRVELEPNALFHYGIGLEDVRAALASANANSPKGAIEFNGTHFQLYTNDQASKAEQ
YRDLVVAYRNGAPVHLRDVGEVVDSVEDLRNLGLINGKRAVLVIIYRQPGANIIDTIDRV
KAMVPQLQAALPADVEITPTSDRSTTIRASLHDTEFTLIVAVALVVMVVFLFLRNWRATL
IPSVAVPISIIGTFAAMYLLGFSLDNLSLMALTIATGFVVDDAIVVLENISRHIENGVPR
MKAAILGAQEVGFTVLSMSISLVAVFIPILLMGGIVGRLFREFALTLSLAIAVSLVVSLT
VTPMMCARLLHEPHNQKPPGRFSRWLERQFVRMQNGYARTLGVALAHPRIVLLVLLATIG
LNVYLYIIVPKGFFPQQDTGRLVGGIQADQSTSFQAMKGKFSEMMKIVQADPAVESVAGF
TGGRQTNSGFMFISLKPKKDRKVSAEQVIQRLRAPLSDVAGVRTFLQAVQDIRAGGRQSN
AQYQFTLLADSTTDLYTWGPKLTDALLNRPELADVNSDQQQGGLESFVTIDRATSARLGI
QPAQIDNTLYDAFGQRQVSTIYNELSQYHVVMEVAPKYWQDPEMLKQIYVSTSGGTASGS
ASTNATTTTSTSTSTSSSSSASSTDTTSSLALASIRNAATNAIAASGKSSSSSGAAVSTS
KETMIPLSTIAKFGPGNTPLSVNHQSQFVASTISFNLPPGKSLSDATAAIYETMATIGMP
STIHGSFAGTAQQFQDSTKDQPILILAALAAVYIVLGILYESYIHPITILSTLPSAGIGA
LLALLLFRTEFSIIALIGVILLIGIVKKNAIMMVDFAIQAQRHGAATSREAIEQACLLRF
RPIMMTTAAALLGALPLAFGTGEGSEMRAPLGIAIVGGLIVSQLLTLYTTPVVYLYMDRI
RIWSEERRARRGQAGPAQVIE
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtcgcaaccgttcatcgcgcgcccggtcgctaccacgttgctcgctatcggc
attgcgctcgccggcctgttcgcgttcacgaagctgccggtcgcgccgttgccgcaagtc
gatttcccgaccatttcggtccaggcgagcttgcccggcgcgagtccggaaaccgtcgcg
accagcgtggcgagtccgctggagcgccatcttggctcgatcgcggacgtcaccgaaatg
acgtcgcaaagctcggtcggctcagcccgtatcacgttgcagtttggtttgaaccgggac
attgacggcgccgcgcgcgacgtgcaggccgccatcaacgcgtcgcgcgccgatcttccc
acggcgctgaaaagcaatccgacttaccacaaggtcaacccggccgacgcgccaatcctg
atcctcgcgctctcctccccgactcgaacggctggttcgctatacgattcggccgcgacc
gtgctgcagcaaacgctatccactgtgcccggtgtgggcgaggtggatgtgagcggctcg
gcgaatcctgcggtgcgtgtggaattggaaccgaacgcgctgttccactacggcatcggc
ctggaagatgtccgtgcggcgctggcgtcggcgaatgcgaacagcccgaagggcgccatc
gagttcaacggcacccactttcagctctatacgaatgaccaggcgagcaaggccgagcag
tatcgcgacctggtggtcgcttaccggaacggcgccccggtgcatctgcgcgatgtcggt
gaagtagtcgattcggtcgaggatctgcgcaacctgggcctgatcaacggcaagcgcgcc
gtgctcgtgatcatttaccgccagccgggcgcgaacattatcgacaccatcgatcgcgtg
aaggccatggtgccacaactccaggccgcgctccccgccgacgtcgagatcacgccgacc
tccgatcgctcgaccacgatccgcgcgtcgctgcacgatacggaattcacgctgattgtt
gcggtggcgctggtcgtgatggtcgtgttcctgtttctgcgcaactggcgcgcgacgctg
attccaagcgtggccgtgccgatctcgatcatcggcaccttcgccgcaatgtacctgctt
gggttctcgctcgataacctctcgctgatggcgttgacgattgcgacggggttcgtggtc
gacgacgccattgtcgtgcttgaaaacatctcgcggcacatagagaacggcgtgccgcgc
atgaaagccgccattcttggcgcgcaggaagtgggtttcacggtgctatcgatgagcatt
tcgctggtcgccgtgtttattcctatcctgttgatgggcggcattgttggccggttgttc
cgcgaattcgcgttgacgttgtcgttggcgattgcggtttcgctggttgtctcgctgacg
gtcacgcccatgatgtgcgcgcgtttgctgcacgaaccgcacaaccagaaacccccggga
cggttttcgcgctggcttgaacgccagttcgtgcggatgcagaacggctacgcgcgcacg
ctcggcgtggcgctcgcacatccgaggatcgtcttgctggtgttgctcgcgaccatcggg
ttgaatgtgtatctgtacatcatcgtgccgaagggatttttcccgcagcaggataccggg
cggctcgttggtggcattcaggctgaccagagcacgtctttccaggcgatgaaaggcaag
ttttccgagatgatgaagatcgtgcaagccgatccggctgtggaaagcgtcgccggtttc
acgggtggacggcaaaccaactcgggcttcatgttcatttcgctgaaacccaagaaggac
cgcaaggtatcggctgaacaggtgatccagcgcctgcgcgcacctctttccgatgtcgcg
ggcgttcggaccttcctgcaagcggtgcaggacattcgcgcgggcgggcggcaatcgaat
gcgcaataccagttcacgctgctggctgattccaccaccgatctctacacgtggggaccg
aagctcactgacgccctgctcaaccgtcccgaactcgctgatgtcaattcggaccagcag
caaggcggtctggaatcgttcgtgacgatcgatcgggcgacgtccgcgcgcctgggcatt
cagccggcgcagatcgacaacacgctctacgacgcgttcggccagcgtcaggtgtccacc
atctacaacgagttgagccagtaccacgtggtgatggaagtcgcgccgaaatactggcaa
gacccggaaatgctcaagcagatttatgtgagcacgtcgggtgggaccgcgagcgggtcg
gcatcgacgaacgcgaccacgactacttcaacgtcaacgtccacgagttcgagcagcagc
gcttcgtcaactgacacgaccagttcgctggcgttggcgtccatccgcaatgccgcgacc
aacgccattgcggcgagcggcaagtccagttcgtcgtcgggagcggctgtgtcaacgtcg
aaggagacgatgatcccgctctcgaccattgccaagttcgggccgggtaacacgccgttg
tcggtgaatcaccagagccagttcgtggcgtccacgatctcgttcaacctgccgcccggc
aagtcactttccgacgccaccgctgccatctacgagaccatggcgaccattggcatgccg
agcacgattcacggcagttttgcgggtacggcgcagcagtttcaggattcgaccaaagat
cagccgatcctgatcctggctgcacttgccgcggtgtatatcgtgcttggaattttgtac
gagagttacattcatccgatcacgatcctctcgacattaccctcggcgggtattggcgcg
ttgctcgcgctgctgctgttcaggacggagttcagcatcattgcgttgatcggggtgatc
ttgctgattggcattgtgaagaagaacgcgatcatgatggtcgacttcgcgatccaggcg
cagcggcatggcgctgcaacgtcgcgcgaggcgatcgagcaggcgtgtttacttcgtttc
cggccgatcatgatgacaacggctgcggcgctgctgggtgcgttgccgttggcgttcggg
actggcgagggatcggagatgcgcgcaccgctcgggatcgcgattgtgggcgggttgatc
gtgagtcagttactgacgctttatacaacaccggtggtttatctttatatggaccggatc
cggatttggtctgaggaacggcgcgcgcgcaggggtcaggcaggtccggctcaagtcatt
gagtga
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