Caballeronia sp. SBC2: SBC2_12650
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Entry
SBC2_12650 CDS
T06459
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SBC2_12650 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_12650 (recC)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SBC2_12650 (recC)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SBC2_12650 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QIE23246
LinkDB
All DBs
Position
1406704..1410093
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AA seq
1129 aa
AA seq
DB search
MLELFYSNRHETLSQALLDDVAAFALNGGDPFASQTIIVPSAAVRRRLELDMAARFGICA
NVDLCYLAQWLWARIGGVLPVPEHSPFAPDRLVWRCFRLLGAMTEAAPESSSRLRVYLDA
ADDSMRYELARRIATVFDHYLTYRPEWLLHWQAGGSILASAGGAIDANGPRLPNATAIQR
EDERWQASLWRALLADLAQDAGAHDPTPPAYRFLSESPKLDLDAVMKAEWPERVSVFALP
TMPPLHIALLRELSRWIDVRIYAIDPCREFWFDIVSEARVEQLELAGKLDFQEVGHPLLA
EWGRQTQAQLHMLRELTESAASREASHFEENPAPTWLARVQNTILNLNEVAELGEADEAL
EPGIEIHVCHSLSRQLEVLHDRLLGWFDEMDGLQPSDVLVAFPDLAAAGPLIDGVFGTAP
AGVAGERRRIPYRITGLPPSQANPVARVLLDWLALPERSVGAPELIEWLRVDAVAARYGI
DAVALETAQTWLAAAGARRGLTPSAVTAADVPAARHTFSDALTRLFLGYALPDGGAPVDE
WLPVGGAQGSDAELLGRLTRFIDDIDAFGERIATPRTPRAWTQLLLDALTQFFDAGLPFA
DSIADVRSTLDALMLSMSEGAVDTEIAADVLRTALTDALDDAARGGVPWGGVTFSSLTSL
RGLPYRVVCLLGMDDGMLPSLARADEFDLMASFGKLGDRQRRDDERNLFLDLLLSARDRL
MIAYTGRSIRDNAALPPAALIDELLDYLAETAAGEGASPKEIERARSRFVFEHPLQPFAP
EYFSAPLFTYEPERAELAQTLALGRSEPATKFFSGPLPAEEVEPVAFDDFERFWRHPARA
ILRDRLGISLFDAETELGDTEPFELEYPGRAALADRVLPALLELTADNEASGLDRARRVA
RASPEMPGGATGGVWQSREISALHSLANRVRVATGEGAERLPFTLDIKPRWPDAELFGRH
DATLQDDALQPLQLHGTLSLLTEEGQIIYRYDVPRARDYLSAWLAHLAYCAALPDGPRRT
VWHGRGTQSSGFELTPVDDPHSHLATLAALYRAGRRMPLRFFPKSAWTWVKESESKAQGV
WISDRTRGESDDPALRIAFRGAELRLDETFAKLARIVFEPLIQHMRSDA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacttttctattcgaatcgccatgaaacgctgtcgcaggcgctgctcgacgac
gtcgccgcgttcgcgctgaatggcggcgatccattcgcgagccagacgatcatcgtgccg
agcgcggcagtgcgccgtcggctcgaactggacatggccgcccgctttggcatttgtgca
aacgtggacctgtgttatctggcgcagtggttgtgggcgaggatcggcggtgtgttaccc
gtacccgagcattcgccgtttgcgcccgaccggttggtgtggcgctgcttccggctgctc
ggagcaatgacggaagcagcgccggagagctcgtcgcgactgcgcgtctacctagatgcc
gccgacgactccatgcgctatgaactcgcgcgccgtatcgcaacggtgttcgatcactat
ctgacgtatcggccggaatggctgctgcactggcaggccggtgggtcgatcctggcgtcg
gccggcggggcaatcgacgcaaacggtccgcgcttgccgaacgccacggccatccagcgc
gaggacgaacgctggcaggcctcgctatggcgtgcgctgctcgccgacctcgcgcaagac
gccggcgcgcacgatcccacgccgcccgcgtaccggttcctgagcgaatcgccgaaactc
gatctcgacgccgtgatgaaggccgagtggccggagcgcgtgagcgtgttcgcgttgccg
accatgccgccgttgcatattgcgttgctgcgcgagttgtcgcgatggatcgacgtgcgg
atctatgccattgatccgtgccgcgagttctggttcgacatcgtgagcgaggcgcgtgtg
gagcaactcgaactggcggggaagctggatttccaggaagtgggccatccgctgctcgcc
gaatggggccgccagacgcaggcgcaattgcacatgctgcgcgagctgacggagagcgcg
gcgtcgcgggaagccagtcatttcgaggagaatcccgcgcccacatggctcgcccgcgtg
cagaacacgatcctcaatttgaacgaggttgccgaactgggcgaagcggacgaagcgctt
gaacccggtatcgaaattcacgtgtgccatagcttgtcgaggcagcttgaagtgttgcac
gatcgtttgcttggctggttcgacgagatggacgggctgcagccgtcggacgtgctcgtg
gcgtttccggatctcgcggcggcgggtccgcttattgatggcgtgtttggcaccgcgccc
gctggcgtggccggtgagcgccggcggattccgtatcggatcacgggcctgcccccttcg
caggcaaacccggtcgcgcgcgtgttgctcgattggctggcgttgcctgaacgcagtgtc
ggcgcacccgagttgatcgaatggttgcgggtcgacgcggtcgcggcgcgttatggcata
gatgccgtcgcgctggaaaccgcgcaaacgtggctcgcggcggccggtgcacggcgcggg
ctcacgccgtcggccgttactgctgcggacgtgcctgctgcccgtcacaccttttccgat
gccctcacgcggttgttcctcggctatgcgttgccggatggcggcgcgcctgtcgacgag
tggctgccggttggcggcgctcaggggtcggacgcggaattgctcggccggctgacgcgg
tttatcgacgacattgacgcgttcggcgagcgtatagccacaccgcgtacgccgcgggcc
tggacgcaattgctgctcgacgcactcacgcagttcttcgatgccggtctgccgtttgca
gactcaatcgccgacgtccggtcgacactcgatgcactgatgctttccatgagcgaaggc
gccgtggataccgaaattgccgccgacgttctgcgaacggcactcaccgacgcactcgac
gacgccgcgcgtggcggcgtcccatggggcggcgtgacgttttcgtcgctgacgagcttg
cgcgggctgccgtatcgcgtggtctgcctgctcggcatggacgacggcatgttgccgagt
ctcgcgcgcgctgacgaattcgacctgatggcgagtttcggcaagctcggtgaccggcaa
cgccgtgacgacgaacgcaacttgttcctcgacttgttgttgtcggcgcgagaccgtttg
atgatcgcgtacacgggacgcagcattcgcgacaacgccgcgctgccgcctgccgcgctg
atcgacgaattgctcgactatctggcggaaacggcggcgggcgagggggcatcgccgaag
gagatcgagcgcgcgcgcagccgtttcgtattcgagcatccgttgcagccgttcgcgccc
gagtacttcagcgcgccgttgttcacctacgagccggagcgcgcggaactggcgcagacg
ctcgcgctcggcaggagcgagccggcaacgaaattctttagcgggccgttgccggcggaa
gaggttgaacccgttgcgttcgatgacttcgagcgtttctggcgtcatccggcgcgcgct
atcttgcgtgatcggctcggcatttcgctcttcgacgctgagaccgaactcggggatacg
gaaccattcgagcttgaatatccgggccgggccgcgctggccgatcgggtgctgcccgcg
ctgctcgagctcaccgccgacaatgaagcaagcggcctcgaccgcgcgcggcgagtcgcg
cgtgcgagtcccgaaatgccaggcggcgcgacgggcggcgtgtggcaatcgcgggaaatt
agcgccttgcattcgcttgccaatagggtgcgtgtcgcgacaggggaaggcgcggagcgc
ttgccgttcacgctggatatcaagccacgctggccggatgccgaattattcggccgccac
gacgctacgttgcaagatgatgctttgcagccgctgcagcttcacggcactctgagtttg
ctcaccgaagaaggccagatcatttaccgatacgacgtgccgcgcgcccgcgactacctc
tctgcatggcttgcacatcttgcctattgcgccgcgttgcccgatggcccgcgacgtacg
gtgtggcacgggcgcggcacgcaatcgagtggctttgaactgacgcccgtcgacgatcct
cactcgcacctggcaacactcgctgcgctatatcgtgccgggcggcgcatgccgctgcgg
ttctttccgaagagcgcgtggacatgggtcaaggaaagcgagtccaaggcgcagggcgtg
tggatatcggacagaacgcgtggcgagtcggacgatcccgcgctgcgtatcgcgtttcgc
ggcgctgaactgagactcgatgaaactttcgccaagttggccaggatcgtcttcgagccg
ttgatccagcacatgcggagcgacgcatga
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