Caballeronia sp. SBC2: SBC2_12730
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Entry
SBC2_12730 CDS
T06459
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00730
Thiamine metabolism
caba01100
Metabolic pathways
caba01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SBC2_12730 (thiC)
Enzymes [BR:
caba01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SBC2_12730 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QIE23254
LinkDB
All DBs
Position
complement(1419953..1421884)
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AA seq
643 aa
AA seq
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MNANPKFLSDDAVVDAAAIAPLPNSRKIYVTGSRADIRVPMREITQSDTNESFGSEKNPP
VYVYDCSGPYSDPEAKIDIRSGLPAVRQGWIEERGDTESLGGLSSNFGRERAADPATADL
RFKGLHRTPRRALPGKNVSQMHYARQGIITPEMEYIAIRENQRRAEYLESLRTSGPNGEK
LATMMGRQHPGQAFGAQAFGANAPKEITPEFVREEVARGRAIIPANINHPESEPMIIGRN
FLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPI
GTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRMTGI
VSRGGSIMAKWCLAHHKESFLYEHFEDICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLG
ELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCDEAPFYTLGPLTTDIAP
GYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKTGIITYKLAAHAADLAKGHP
GAQVRDNALSKARFEFRWDDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSM
KITQDVREYAAKQGVSDIEALKQGMETKAIEFVKKGAEIYQRT
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaatccgaaatttctgtccgacgacgctgtcgtcgacgctgctgccatcgcg
ccgctgcccaactcacgcaagatctacgtgacgggctcacgtgccgacatccgcgtgccg
atgcgggaaatcacgcaatccgataccaacgaaagtttcggcagcgaaaaaaatccgccg
gtctatgtctacgattgctcaggcccatattcggacccggaggcaaagatcgatatccgc
tcgggtctgccagccgttcgccagggttggattgaagaacgcggcgatacggaatcgctc
ggcggtctctcaagcaacttcggccgtgagcgcgccgccgatccggctactgccgacctg
cgtttcaaaggcttgcatcgcacgccgcgccgcgctctgccgggcaagaacgtttcgcag
atgcactacgcgcgccaaggcatcatcacgccggagatggaatacatcgcgatccgcgag
aaccagcgccgggctgaatatctggaatcgctgcgcacgagcggcccgaacggcgaaaag
ctcgccacgatgatgggccgccagcatcccggccaggcgttcggcgcccaggctttcggt
gccaacgcgcccaaggaaatcacgcccgagttcgtgcgcgaggaagtcgcccgcggccgc
gcgatcatcccggcgaacatcaaccacccggaaagcgagccgatgatcatcggccgcaat
tttctggtgaagatcaatgcgaacatcggcaattcggcggtgacatcatccatcggcgaa
gaagtcgacaagatgacctgggccatccgctggggcggcgacaccgtcatggatctgtcg
accggcaagcacattcacgaaacgcgcgagtggatcatccgcaatagcccggtgcccatt
ggcacggtgccgatttatcaggcgctcgaaaaggtcaacggcaaggccgaagacctgacc
tgggaaattttccgcgacacgctgatcgaacaggcggaacagggtgtggattacttcacg
atccacgccggcgtgctgctgcgctacgtgccgatgaccgcgaaccgcatgacgggcatt
gtgtcgcgcggcggttccatcatggcgaaatggtgtctggctcatcacaaggaaagcttc
ctgtatgagcacttcgaagacatctgcgaaatcatgaaggcctacgacgtgagcttctcg
cttggcgacggcctgcgtcccggctcgatctacgatgccaacgacgaagcccagcttggc
gaactgaagacgcttggcgagttgacgcagattgcgtggaagcatgacgtgcaggtgatg
atcgaaggtccgggccatgtgcccatgcagctcatcaaagagaacatggacctgcaactc
gactggtgcgacgaagcgccgttttacacgcttggaccgctcaccacggatatcgcgccg
ggttacgaccacatcacgtctgggattggcgccgcgatgatcggctggttcggcacggcc
atgctctgctacgtcacgccgaaggaacacctcgggctgccgaacaaggacgacgtgaag
accggcatcatcacctacaagctcgcggctcacgccgccgatctggcgaagggtcatcca
ggtgctcaggtgcgggacaacgcgttatcgaaagcgcgcttcgaattccgctgggacgac
cagttcaacctcggcctcgatccggacaaggcgcgtgaattccacgacgaaaccctgccg
aaggattcggctaaagtcgcgcatttctgctcgatgtgcggcccgcacttctgttcgatg
aagatcacccaggacgtccgcgaatatgcggcgaagcaaggggtatcggatatcgaggcg
ctgaagcaaggcatggaaacgaaggcgatcgagttcgtgaaaaaaggcgctgagatttac
cagcgcacctaa
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