Caballeronia sp. SBC2: SBC2_12940
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Entry
SBC2_12940 CDS
T06459
Name
(GenBank) Head domain of trimeric autotransporter adhesin
KO
K21449
trimeric autotransporter adhesin
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_12940
Transporters [BR:
caba02000
]
Other transporters
Pores ion channels [TC:
1
]
SBC2_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
ESPR
Motif
Other DBs
NCBI-ProteinID:
QIE23274
LinkDB
All DBs
Position
complement(1444609..1447467)
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AA seq
952 aa
AA seq
DB search
MNRIFKAVWNETSGTWVAASETSKSKSKRSSSAGKLVMVQAAIVGGLLAGSAAHAQSVDD
WAGIGTGSDSTRLAPSAVASGAQSVAIGIDSNASSDQTTAVGWKASASGEFSTALGNRSV
AAGMGSTAVGAGAKGYDDGGTAFGMFSTADGTNAVAVGPYARTKGDGAIALGSDALVQGP
NLDAAANAIAIGSTSRAMAANAVALGASTTASGDSAVAVGPNAAASGASSMAFGDTAVAT
GAQSIAAGAGAAASADSATAVGALAEANALNGVAVGSYAVAAEENSVAVGTNSAAKKNAA
AVGPRAAALGESSIALGDTAIANANQSSALGANATASAVGSTAVGTSAQAQGANALAAGS
YATAAGDNSVAAGNSAKSAQSAVAVGFNAQAEGDTSSAIGTNSLAIGARSTALGQGAVAF
GDDSTAVGSLANANRTNGVAIGFNSGATGANSVATGANTIASDSAVAVGDTALATKAQSI
AIGANAQASAVDATAFGDSAQATDVDALAVGHSAIAAGTSSIAVGSNANAAFENSIAIGN
NAIANNANSVALGAGSATTVGAQSGYAAYGLSGSQTSTGEVNVGGRTISGVAPGAADTDA
VNVAQLKAVSDQSTAAITAATAAADGAVKYDRNADGSVDHANATLEGDGGTTLHNVAAGV
ETTDAVNVGQLNDAIGQVNASVGDAVNNAVNNAVKNIVVDPSDSLFSADGSRSTQAASAT
GVEAVAIGANAVAAGAGSVAMGSGAQASADNAVALGQNALAAGTGSVAMGNGAQASADNT
VALGQNAIATGTGSVATGNGAQASADNAVALGQNSVADRANTVSVGAAGSERQITNVAPG
TQGTDAVNLNQLNQSAGSTLKQANDYTDSKTEGTRRDAYAGTASALAVAGLPQAVLPGRG
MVALGGGTYGGQSAVAIGVSQLSENGIWAYKVSGTTSTRGQFGVSVGAGMHW
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaatctttaaagcggtctggaacgaaacctccggcacatgggtcgcggcttcc
gagacgtcgaagtcgaagagcaagcgctcttcatcagcaggcaaattggtcatggtgcaa
gcggcaatcgtcggcggcctgctggccggttcggccgcgcacgcgcaatcggtcgatgat
tgggctggaataggcacgggatccgattcgactcgcctcgcaccgagcgcggtagcaagc
ggagcgcagtcggttgccatcggtattgacagtaacgcatcctccgaccagacgacagca
gtcggctggaaggcctcagcatcgggtgaattttcaacagcgcttggaaaccggagcgtc
gctgcgggcatggggtccacggcggtcggtgctggggcgaaaggctacgacgacggcggg
actgcattcggtatgttcagcaccgcagacggaacgaacgctgttgcggtaggtccttac
gcccgaacaaagggcgacggtgccattgccttaggcagtgacgcgcttgtgcaaggaccg
aacctggacgctgcggcaaacgcgatcgcaatcggctcaacaagtagagccatggcagcc
aacgcggttgcgctgggcgcaagtaccaccgcatccggcgatagcgcggtggcggttggc
cccaacgctgcggcgagcggagccagctcgatggcattcggcgataccgcagtagcgacc
ggagcgcagtcaatcgccgctggtgcgggcgctgcggcgtccgccgacagcgcgaccgct
gttggcgcgcttgcagaggcaaacgcgcttaatggcgtggccgttggcagctatgccgtc
gccgcagaagagaactccgtcgccgtcggcacgaactcggcagcgaagaaaaacgcggct
gcggtcggaccacgcgctgcggctcttggtgaaagttcgatagctctcggcgatacagcc
atcgcgaacgccaaccagtcgagtgccttgggcgcgaacgctacggcctcagccgtgggc
tcaaccgctgttggcacttcggcccaggcgcagggcgcgaacgcgcttgcggcgggtagt
tacgccactgccgcaggagacaactccgtcgctgcgggcaactccgcgaaatcggcgcaa
agcgctgtggccgttggattcaacgcacaagccgaaggtgacacttcgtcggccatcggc
acgaactcccttgctatcggagcacgatcgacagccttaggccagggcgccgtggcattc
ggggacgactcaactgcagtcggctcgctcgccaacgcgaaccgtacgaacggtgttgca
atcggatttaactcaggtgccaccggcgcaaactccgttgcaaccggcgcgaatacaatt
gcatcggacagcgctgttgcggtcggcgacacggccctggcaacgaaagcgcaatccatc
gctattggcgcgaatgctcaggcatccgctgtcgacgcaaccgcctttggcgattcggcg
caagcaaccgacgtcgacgccctcgcagtcggccactcggcaatcgcagccggcacgagc
agcatcgcggttggcagcaacgccaacgcagcgttcgaaaactcgatcgccatcggcaac
aatgcgattgcgaataacgccaacagcgtggcgctcggcgcgggatcggcaacaacggtc
ggtgcacaatccggctacgccgcttacggcttgtcgggatcgcaaacgtcgacgggtgaa
gtcaacgtcggtggccgcacgatcagcggcgttgcacctggcgcggcagataccgacgcg
gtcaacgttgcacagttgaaagcagtcagcgaccagtcaaccgctgcgatcaccgcagca
accgccgcagccgacggcgcagtcaaatatgaccgcaacgccgacggctcggttgatcat
gcaaacgccacgctggaaggtgatggcggtacgactcttcacaacgtcgctgccggtgta
gaaacaactgacgcggtgaacgtcggtcagttgaacgacgctatcggtcaggtcaacgcg
agcgttggcgatgccgtcaacaacgcggtgaacaacgcagtgaaaaacatcgttgtcgac
ccgagcgattcgctgttcagcgcggatggttcgcgcagcacgcaagccgcatcggcgacg
ggtgttgaggcggttgcaataggcgcaaacgcagtggcggctggcgcgggttcggttgcc
atgggcagcggcgctcaggcttctgccgataacgccgtcgcgctcggccagaacgcgttg
gccgctggtaccggctcggttgccatgggtaacggcgctcaagcttcagccgacaacact
gtcgcgctcggccagaacgcaattgccactggcaccggttcggttgccaccggtaacggc
gctcaagcttcggccgacaacgccgtcgcgctcggccagaactccgtcgcagatcgcgcg
aacacggtttcggtcggtgccgcaggaagcgaacgtcagatcacgaacgtcgcgccgggc
acacaaggcaccgacgcagtcaacctgaaccagttgaaccaaagcgccggcagcacgttg
aagcaagccaacgactacaccgactcgaaaacggaaggcacgcgtcgcgatgcctacgcc
ggcacggcgtcggcgctcgcagtcgcaggcttgccgcaagcggtattgccaggccgcggc
atggtggccttgggtggcggcacgtatggcggtcaatccgcagtcgcgatcggtgtatcg
caactgtctgagaacggcatctgggcttacaaggtaagcggtacgacaagcacgcgcggt
cagttcggcgtctcggtcggtgccggcatgcactggtaa
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