| Entry |
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| Name |
(GenBank) HhH-GPD superfamily base excision DNA repair protein
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| KO |
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| Organism |
caba Caballeronia sp. SBC2
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:caba00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBC2_13810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:caba03400]
SBC2_13810
Enzymes [BR:caba01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SBC2_13810
DNA repair and recombination proteins [BR:caba03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBC2_13810
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1540230..1541318
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| AA seq |
362 aa
MATARKAPAKRAASGSIAVPASRVARRAQVKTSKVSTPEAKLANGAAHDGERKTASKKRA
VNGVVHDGVAKTNGLVRAHKTVRATAPKVASKVAPKKASGDANGVLDVKAVETNVSADAM
QALVRAPQSDGEIVRKSRAITAEKTVPVQTPGLSVEAARPEYWDKACADLVKRDRILKKL
IPKFGPVHLINRDDPFTTLARSVVGQQISVTAAQAIWKRVEGACPTLAPQQFIKVGPAKL
QSCGLSKRKSEYILDVAQHFVSGALHVDSWTSMEDEAVIAELTQIRGIGRWTAEMFLIFN
LSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLYPVPA
DH |
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| NT seq |
1089 nt +upstreamnt +downstreamnt
atggcaacggccagaaaggcgccggctaaacgagccgcgtccggtagtatcgcagtgccc
gcgagcagggtcgcgcggcgtgcgcaggtgaaaacgtcgaaggtgtcgacgcccgaggcg
aaactcgccaacggtgctgcccacgacggagaacgcaagacggcatcgaaaaaacgtgcg
gtcaatggcgtagttcatgacggcgttgctaaaacgaacggcctcgttcgtgcacacaag
acagtgcgggcaaccgcgccgaaagtggcatccaaggtggcgcccaagaaggcgagcggc
gacgctaatggcgtgctcgacgtgaaagccgtcgagaccaacgtcagcgctgacgcaatg
caggcgctcgtgcgtgctccgcagagcgacggcgagattgtccgcaagtcgcgtgcgatc
acggccgagaaaactgtgccggtgcagacgcccggcttgtcggtggaagccgctcgtccc
gagtattgggacaaggcgtgtgccgacctcgtcaagcgcgaccgtattctcaagaaactg
attccgaagttcggcccggtgcatctgatcaatcgcgacgatccgttcaccacacttgcg
cgttcggttgtcggtcagcaaatttccgtgacggccgcgcaggctatctggaagcgtgtg
gagggtgcgtgcccgacgctcgcgccgcagcagttcatcaaggtgggaccggcgaagttg
cagtcgtgcgggttatcgaaacggaagtcggaatatatcctcgacgtcgcgcagcatttc
gtttcgggcgcgctgcacgtggatagctggacatcaatggaagatgaagctgtgatcgcg
gagttgacgcagattcgcggcattggccgatggacggcggaaatgttcctgatcttcaac
ttgtcgcgcccggacgtcctgccgctcgatgacctcggcctgatccaggccatcagcgtc
aactatttcagcggtgaacccgtaacccgcagcgaagcgcgcgaagtcgcggccaactgg
gaaccgtggcgcaccgtcgcgacctggtacatgtggcgcagcctttaccccgtccccgcc
gatcactaa |
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