Caballeronia sp. SBC2: SBC2_13810
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Entry
SBC2_13810 CDS
T06459
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBC2_13810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_13810
Enzymes [BR:
caba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SBC2_13810
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBC2_13810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIE23361
LinkDB
All DBs
Position
1540230..1541318
Genome browser
AA seq
362 aa
AA seq
DB search
MATARKAPAKRAASGSIAVPASRVARRAQVKTSKVSTPEAKLANGAAHDGERKTASKKRA
VNGVVHDGVAKTNGLVRAHKTVRATAPKVASKVAPKKASGDANGVLDVKAVETNVSADAM
QALVRAPQSDGEIVRKSRAITAEKTVPVQTPGLSVEAARPEYWDKACADLVKRDRILKKL
IPKFGPVHLINRDDPFTTLARSVVGQQISVTAAQAIWKRVEGACPTLAPQQFIKVGPAKL
QSCGLSKRKSEYILDVAQHFVSGALHVDSWTSMEDEAVIAELTQIRGIGRWTAEMFLIFN
LSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLYPVPA
DH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccagaaaggcgccggctaaacgagccgcgtccggtagtatcgcagtgccc
gcgagcagggtcgcgcggcgtgcgcaggtgaaaacgtcgaaggtgtcgacgcccgaggcg
aaactcgccaacggtgctgcccacgacggagaacgcaagacggcatcgaaaaaacgtgcg
gtcaatggcgtagttcatgacggcgttgctaaaacgaacggcctcgttcgtgcacacaag
acagtgcgggcaaccgcgccgaaagtggcatccaaggtggcgcccaagaaggcgagcggc
gacgctaatggcgtgctcgacgtgaaagccgtcgagaccaacgtcagcgctgacgcaatg
caggcgctcgtgcgtgctccgcagagcgacggcgagattgtccgcaagtcgcgtgcgatc
acggccgagaaaactgtgccggtgcagacgcccggcttgtcggtggaagccgctcgtccc
gagtattgggacaaggcgtgtgccgacctcgtcaagcgcgaccgtattctcaagaaactg
attccgaagttcggcccggtgcatctgatcaatcgcgacgatccgttcaccacacttgcg
cgttcggttgtcggtcagcaaatttccgtgacggccgcgcaggctatctggaagcgtgtg
gagggtgcgtgcccgacgctcgcgccgcagcagttcatcaaggtgggaccggcgaagttg
cagtcgtgcgggttatcgaaacggaagtcggaatatatcctcgacgtcgcgcagcatttc
gtttcgggcgcgctgcacgtggatagctggacatcaatggaagatgaagctgtgatcgcg
gagttgacgcagattcgcggcattggccgatggacggcggaaatgttcctgatcttcaac
ttgtcgcgcccggacgtcctgccgctcgatgacctcggcctgatccaggccatcagcgtc
aactatttcagcggtgaacccgtaacccgcagcgaagcgcgcgaagtcgcggccaactgg
gaaccgtggcgcaccgtcgcgacctggtacatgtggcgcagcctttaccccgtccccgcc
gatcactaa
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