Caballeronia sp. SBC2: SBC2_14220
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Entry
SBC2_14220 CDS
T06459
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBC2_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_14220
Enzymes [BR:
caba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SBC2_14220
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBC2_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIE23398
LinkDB
All DBs
Position
1580068..1581075
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AA seq
335 aa
AA seq
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MALHKSMLEEFGLGTVWVRRGAASASADVSAAVLDQSTDSTAKVLDHAAAEGHRPVPRLP
VEEQHAPVVRKADPVDTLTALDAALSAAQASPGNTHQTPAAKIDSPRLASAEPPVFDDLP
WLDDVPPQPLVASETIDDTAADIATLDWDTLAARVSVCERCRLCERRTNSVFGVGDRNAD
WMLIGEAPGENEDKLGEPFVGQAGKLLDSMLHAVALSREDNVFIANVIKCRPPGNRNPEL
DEVARCEPYLKRQVELVKPKLIVALGRFAAQSLLKTEASIASLRGRVHDYQGVPVIVTYH
PAYLLRSLPDKAKAWADLCLAEATYRKSLQAADGP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcataagtcgatgctggaagagttcgggctaggaacggtctgggtgaggcgg
ggggcggcttcggcttcggctgatgtgtccgccgctgtgcttgatcagtcgacagattcg
acggcgaaggtgctcgaccatgccgccgccgaggggcatcgaccggttccgcgtctgccg
gtcgaagaacagcacgcgccggtggtccggaaggctgatccagtcgacacgctgacagcg
ctcgatgccgctctttccgccgcgcaggcgagccccggcaacacgcatcaaacgccggct
gcaaagatcgactcgccccggctcgcttctgcagaaccgccagtcttcgatgacctcccg
tggctcgacgatgtgccgccgcaaccgctggtcgcatcggaaaccatcgatgacacggct
gccgatatcgcgaccctcgactgggacactctggccgctcgcgtctccgtttgcgaacgc
tgccgcttgtgcgaacgtcgcacgaactcggttttcggcgtgggtgaccgaaacgcggac
tggatgctgatcggtgaagcgccgggcgagaacgaggacaagctgggtgaaccgttcgtc
ggccaggcgggcaagctgctcgacagcatgctgcacgcggtggcgttatcgcgcgaggac
aacgtgttcatcgcgaacgtgatcaagtgccggccgcccggtaaccgcaatccggaactc
gatgaagtcgcgcgctgcgagccctatctgaagcggcaggtcgaactggtcaaacccaag
ctgattgttgcgcttggacggtttgccgcgcagagcctgctcaagacggaggcgagcatt
gcgtcgctgcggggacgggtgcacgactatcaaggtgtgccggtcattgtcacgtatcac
ccggcctacttgctgcgcagtctccccgataaagccaaggcatgggccgatctgtgtctt
gccgaggctacataccgcaagtcgctgcaggcggcagacggcccgtga
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