Caballeronia sp. SBC2: SBC2_14370
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Entry
SBC2_14370 CDS
T06459
Symbol
dapE_1
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00300
Lysine biosynthesis
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01230
Biosynthesis of amino acids
Module
caba_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SBC2_14370 (dapE_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
caba01002
]
SBC2_14370 (dapE_1)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SBC2_14370 (dapE_1)
Peptidases and inhibitors [BR:
caba01002
]
Metallo peptidases
Family M20
SBC2_14370 (dapE_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
QIE23413
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Position
complement(1598192..1599331)
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AA seq
379 aa
AA seq
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MSGTLLLSEQLIARASVTPDDQHCQNLLIERLSAIGFECETIASGGVTNLWAVKRGTDGT
DGKLLAFAGHTDVVPTGPLEQWTSPPFVPTHRDGKLYGRGSADMKTSIAAFVVSSEEFVA
AHPAHRGSLAFLITSDEEGPATDGTVKVIEALKARGERLDYCIVGEPTSSATLGDMVKNG
RRGSMSGKLVVKGVQGHIAYPHLAKNPIHLLAPALAELVSTHWDNGNEYFPPTTWQVSNL
HSGTGATNVIPGHIELMFNFRFSTASTVEGLQSRVHAILDKHALDYDLAWSVSGLPFLTP
RGTLSNALEQAILDETGVRTELSTTGGTSDGRFIARICEQVVEFGPPNGSIHKIDEHVEV
AFIEPLKNVYRRVLETLLA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcacccttcttctctcggaacaactcatcgcgcgcgcgtctgtcacgcccgac
gaccagcattgccaaaacttgctgatcgagcggttatcggcgataggcttcgagtgcgaa
acgatcgcgtccggcggcgtcacgaacctctgggccgtgaaacgcggcacggacggaacc
gacggcaagttgctcgcgttcgccggccacaccgacgtcgtgccgactggtccgctggaa
caatggacatcgccgccgttcgtgccaacccaccgcgacggcaagctgtacggccgcggc
tcggcggacatgaagacgtcgatcgcggcattcgttgtgtcgagcgaagagttcgtcgcg
gcgcacccggcacaccgcggctcgctcgcgttcctgatcaccagcgacgaagaaggcccc
gccaccgacggcacggtcaaggtgatcgaagcactaaaggcacgtggcgagcggctggac
tattgcattgtcggggaacccacctccagcgccacgctcggcgatatggtcaagaatggc
cggcgcggttccatgtccggcaaactggtcgtgaaaggcgtgcaagggcatattgcttat
ccgcatctcgcgaagaatccaattcatttgctcgcgcccgcactggctgaactggtttcc
acgcattgggacaacggcaacgaatatttcccgccgaccacgtggcaagtgtccaacctg
catagcggcacgggcgcaacgaacgtgatcccgggtcacatcgagctgatgttcaatttc
cgcttctccacggcgagcacggtggaagggctgcaaagccgcgttcatgcaatcctcgat
aaacacgcgctggactacgatctcgcgtggagcgtgagcggcctgccgttcctcacgccg
cgtggcacgttgtcgaacgcgctggaacaagccattctcgatgaaaccggcgtgcgcacc
gaactgtccaccacggggggcacgtcggatggccgcttcattgctcgcatctgcgaacag
gtggtcgagttcggaccgcccaacggcagcattcacaagatcgacgagcatgttgaagtc
gcgtttatcgaaccgttgaaaaacgtctataggcgtgtgcttgaaaccctgcttgcctga
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