Caballeronia sp. SBC2: SBC2_18550
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Entry
SBC2_18550 CDS
T06459
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00071
Fatty acid degradation
caba00362
Benzoate degradation
caba00650
Butanoate metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
caba01212
Fatty acid metabolism
Module
caba_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SBC2_18550 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SBC2_18550 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SBC2_18550 (fadB)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SBC2_18550 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
F420_oxidored
Pyr_redox_2
ApbA
DAO
NAD_Gly3P_dh_N
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
QIE23826
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All DBs
Position
2035578..2037662
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AA seq
694 aa
AA seq
DB search
MAVDYTTRDGIAVITLNNPPVNGLGFSTRLGIVEGVEKAQTDASVSAIVIIGAGKAFSGG
ADITEFNTPKATQEPTLHTVIKVVEGSAKPVVAAIHSVAMGGGLELALGAHYRVASAGAQ
IALPEVKLGILPGAGGTQRLPRAVGLETALNMIVSGAPVMSEKLAGTSLFDQMAQGDLLD
EAVKFAQKVGTQNGPHPKVRDRKIDHPNAEGFIQFARNGVTPLAKNFPAPLKCIDAVEAG
VKLGFDKGLAVERECFMALVQTPESRALRHAFFGERAASKIPDVPSSTPVRKIERVGVIG
AGTMGGGIAMNFVNAGLPVTLLETKQEALDRGLATIRKNYESAVKKGRLTAEKLEERMAL
ITPTLSYDALSDADLIIEAVFEELGVKEQVFSKLDQVAKKGAILASNTSTLDVDKIAAFT
KRPEDVVGMHFFSPANVMKLLEVVRGAKTSKDVLATVMQLAKKIKKTAVVSGVCDGFIGN
RMIEQYLRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEKP
DLKYSKIADRLCETGRFGQKTGAGWYDYKAGDRTAHPSKIVDEMIVAYSKEQGVTRRKIS
DDEIVERLVFALVNEGALILEEGIASKASDIDMVYLTGYGFPLYRGGPMLYADTVGLYNV
ERAMRKYGAQANGDAWQPAARVAELAAEGRGFNS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggactacacgactcgcgacggcatcgccgttatcacgctgaacaatccgccg
gtgaacggccttggattctctacgcggcttggcattgtcgagggcgttgaaaaagcgcag
acggacgcctcggtcagtgcgatcgtgatcatcggcgcgggcaaggcgttttccggtggc
gccgacatcaccgaattcaacacgcccaaggcaactcaggaacccacgctgcacacggtc
atcaaggtcgttgaaggaagcgccaagcctgtcgtggccgcaatccacagcgtggcaatg
ggcggcggcctcgaactggcgctgggcgcgcattatcgggtggcatcggcgggagcgcag
atcgcgttgcccgaagtcaagctcggcatcctgccgggcgcaggcggcacgcagcgcttg
ccgcgcgcggtcgggctggaaactgcgctgaacatgatcgtgtcgggtgcgccggtgatg
tcggagaaactggctggcacgagcttgttcgatcaaatggcgcaaggcgatctgctcgac
gaagccgtcaaattcgcgcagaaagtcggcacgcaaaacggcccgcatccgaaggttcgc
gatcgaaagatcgaccatccgaacgccgagggttttatccagttcgcgcgcaacggcgtc
acgccgctggcgaagaacttcccggcaccactcaaatgtatcgatgcggtggaagccggc
gtgaagctcggtttcgataaaggcctggccgtcgaacgagaatgttttatggcgctggtg
cagacgcctgaaagccgcgcgctgcggcacgcgttcttcggcgaacgcgcggcgagcaag
attcccgatgtgccttcgagcaccccggtgcgcaagatcgaacgcgttggcgtgattggc
gcagggacgatgggcggcggcatcgccatgaatttcgtcaacgcgggcctgccggtgacc
ctgcttgaaacgaagcaggaagcgctcgatcgtggccttgccaccatccgcaagaactac
gaaagtgctgtcaagaagggtcgtttgacggcggagaaactggaagagcgcatggcgctg
attacgcccacgctttcctacgacgcactcagtgatgccgacctgatcatcgaagcagtg
ttcgaagaactcggcgtgaaagagcaggtattttcgaaactcgatcaggtcgcgaagaag
ggggcaatcctggcatcgaatacgtccacgctcgacgtcgacaagattgccgcgttcacc
aagcgtcccgaagacgtggtcggcatgcacttcttcagcccggcgaacgtcatgaagctg
ctggaagtcgtgcgtggcgcgaagacgtcgaaagacgtgctcgccacggtcatgcaactc
gccaagaagatcaagaagacagccgtggtgtcgggcgtctgcgatggttttatcggcaac
cggatgatcgagcagtatctgcgtcaagcgctgttcatgcttgaagaaggcgcgttgccg
gcgcaagtggatcgtgcgatcgaaaaattcggcttcgctatgggaccgttccgcatgagc
gatctcgcgggcaatgacattggctgggcgatccgcaagcgccgttatcaagagaagcca
gatctgaagtattcgaagatcgcggaccgcttgtgcgagaccgggcgcttcggacaaaag
accggcgcgggttggtacgactacaaggccggcgatcgtacggcgcatccgtcgaagatc
gtcgacgagatgattgttgcgtattcgaaggagcaaggtgtcacgcggcgcaagatctcc
gacgacgagattgtcgaacggctggtgttcgcgctcgtcaacgaaggcgcgctgatcctg
gaggaagggattgcatcgaaggcgtcggacatcgacatggtctacctgaccggctacggt
ttcccgctgtatcgcggcggaccgatgctgtatgcggatacggtcggcctgtacaacgtc
gaacgcgcgatgcgcaagtatggcgcccaagccaacggcgatgcatggcagccagctgcg
cgcgtagccgaactggccgcagaagggcgcggctttaatagctag
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