Caballeronia sp. SBC2: SBC2_20580
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Entry
SBC2_20580 CDS
T06459
Symbol
ku_1
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SBC2_20580 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_20580 (ku_1)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SBC2_20580 (ku_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
FXR_C1
DUF3284
Motif
Other DBs
NCBI-ProteinID:
QIE24029
LinkDB
All DBs
Position
complement(2273909..2274829)
Genome browser
AA seq
306 aa
AA seq
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MPHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRSMDPIGYKQFNKNTGKDVTRDN
IVRGFEYEKGKYVVMSDAEIRSANPESTQTVDILAFVEAPEISFLSLDTPYYLAPDRKGE
KVYALLRDALKASGKVGIANVVLHNKQHLAALIPVGPALALNTLRWADEVREFDDFKFPD
ENSKKAGVSPKELEMAQRLIDDMSDTWNPHDYHDTFREDIMALVNKKVKEGKTEEVSEVE
EGAPSKASAEILDLSELLKRSLKKGKPATKRSAKSTGGAEDDTADTDAAEPAAKPARKTT
TRRKRA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccacacatgatctggaaaggcgcgatcagcttcgggctggtccacgtccccgtgcag
ctttacccggcgacgcagtcggagaaggtcggctttaacctgctcgacaagcgctcgatg
gaccccatcggctataagcaattcaacaagaacacgggcaaggacgtcacgcgcgacaac
atcgtgcgtggcttcgagtacgagaagggcaaatacgtcgtgatgagcgacgccgaaatt
cgctcggccaatccggaatcgacgcagaccgtggacatcctcgcgttcgtggaagctccg
gaaatctcgtttctctccctcgataccccttattacctcgctcccgatcgcaagggcgag
aaggtgtatgcgttgctgcgcgacgcgttgaaggcgtccggcaaagtcgggatagcgaat
gtggtgctgcacaacaaacagcatcttgccgcgctgattccggtgggtcccgcgctggcg
ctcaacacgttgcgctgggcggatgaagtgcgcgaattcgatgacttcaagttcccggac
gaaaactcgaagaaggcgggggtgtcgccgaaagaactggagatggcgcagcggttgata
gatgacatgagcgatacgtggaacccgcacgattatcacgacacattccgcgaagacatc
atggcgctagtgaacaagaaggttaaggaagggaagacggaggaggtgtcggaggtcgaa
gagggcgcgccgagcaaggcgtcggcggagatcctcgacttgtccgaactactgaagcgc
agtttgaagaaggggaagcctgctacgaaacgcagcgctaaaagcaccggtggcgccgag
gacgacacggctgacaccgacgccgcggaaccggcagctaaaccagcacgcaagacaaca
acgcgccgcaaacgtgcctaa
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