Caballeronia sp. SBC2: SBC2_21100
Help
Entry
SBC2_21100 CDS
T06459
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03030
DNA replication
caba03430
Mismatch repair
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBC2_21100
03430 Mismatch repair
SBC2_21100
03440 Homologous recombination
SBC2_21100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caba03032
]
SBC2_21100
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_21100
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBC2_21100
DNA replication proteins [BR:
caba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBC2_21100
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBC2_21100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_assoc_2
AAA_22
AAA_14
AAA_5
AAA_18
AAA_30
TsaE
DUF3646
AAA_2
Mg_chelatase
AAA_24
Glyco_tranf_2_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QIE24081
LinkDB
All DBs
Position
complement(2334762..2337665)
Genome browser
AA seq
967 aa
AA seq
DB search
MTYQVLARKWRPKSFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSTPCGVCRACKEIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPAHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GQIVGHLEHVLGEEQIPYESQALRLLSRAADGSMRDALSLTDQAIAYSANQVTEEAVRGM
LGALDQSYLIRLLDTLAAGDGQGVLGIADEMALRSLSFSTALQDLAGLLHRIAWAQYAPA
SVLDEWPEATDIRRFADLLSAEHVQLFYQIATIGRGEMGLAPDEYAGFTMTLLRMLAFEP
AGGPGGGGGGGARVRPAVVGSPSAVAREAAPSGVVAGAAGGAGLLAAGAAKSLVNRVADI
ASTRADTTDSDREKEKAPLSQDAGQSAVTAHNAAADGRDSAPTPVAGSDAVSRENPAATS
DEVVQSPAVEPVPAVTPRVTAEPDRTPEVANIPAVAQTRVIDPDNAAQGKAEALTDKPVE
GHGDAVEVDAVDAQSAPAIIPAGSASPEVPALSSDPQPSADTPSLSASSDASLDDVLAVP
ESEPDSNSAMLAAAAQELIDRAAGERVENRAENRAENRAEKPAENRAAPPAEKIASPRAT
GGASAALDVLRSAGMRVSSDRGARAPEPVRKPVAPKATPAVQVPVPRRPAASADRGTAPA
ADDSRFNGAQSNANGNDKNAGAPSGANGTGAIASRNSGGATPPWEEMPLDDYQPVSSEDG
YFMPPDDGFMPAFDSGPDDLRFNDAPATKPAPRVDARPLPPAVPLDAIGVSGDWPTLAVD
LPLKGIAYQLAFNSELTACDDTSITLAVPVPQYAESAQVAKLKAALTDKLGRPIDVNVSV
GPARRTAAALDAAVRAQRQQEAEQEITQNPFVQSLIRDFGASIVQGSIKPLASGNAQDGG
RNAASAN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcggcccaaatctttcgcttcgctcgttggc
caggagcacgtggtacgtgcgcttacgcacgcgctcgacggcggacggctgcaccatgcc
tatctgttcaccggcacgcgcggtgtcggcaagacaacgctgtcgcgaatcttcgccaag
gcgctcaattgcgagaccggcgtgacatccacgccgtgcggcgtatgccgggcgtgcaag
gagatcgatgagggacggtttgtcgattatgtggagatggacgcggccagtaatcgcggc
gtggacgaaatggccgcgctgctcgagcgcgcggtatacgccccggtcgacgcgcgtttc
aaggtctacatgatcgacgaagtgcacatgctcacgaaccacgcgttcaacgccatgttg
aagacgctggaagagccgcccgcacacgtcaagttcatcctggccaccaccgatccccag
aagatcccggtcaccgtgctctcgcgctgcctgcaattcaatctgaagcagatgccggca
gggcagatcgttgggcatctggaacatgtgctcggcgaagagcagatcccttacgagtcg
caagcgttgcgtcttttgtcgcgtgccgccgacggcagcatgcgcgacgcgctttcgctc
actgaccaggccatcgcgtattcggcaaaccaggtcaccgaggaggccgtgcgcggcatg
ctcggtgcgctcgaccagagttatctgatccgcttgctcgataccctcgcggccggcgac
gggcagggcgtgcttggcatcgcggacgagatggctttgcgcagtttgtcgttttccacg
gcgttgcaggacttggccggcttgttgcaccggatcgcgtgggcgcagtacgcgccggct
tcggtgctggacgaatggccggaggcaaccgatatccgccggttcgcggacttgctcagc
gccgagcacgtgcaattgttctatcagattgcgacgatcgggcgcggcgagatgggtctg
gcaccggatgaatacgccggtttcaccatgaccctgttgcgcatgcttgcgttcgaaccc
gcgggtggtccgggcggaggcggtgggggcggcgcgcgggtgaggccggcagtcgtgggt
tcgcctagtgcagtggcacgtgaagcggcgccgagtggtgttgtagccggtgcagccggt
ggggcgggtttgttggctgcgggtgcggcgaagtcgctggtgaatcgtgtagccgatatc
gcttcgaccagagcggacactacggattcggatcgcgaaaaagagaaagcgccgctgtcg
caggatgcaggtcaatcggcggtgactgcccacaatgctgccgcggacgggcgcgattcg
gctcccacgccggtggcgggttcggacgcggtctcgcgcgaaaatcctgctgcgactagt
gacgaagtcgtgcaaagcccggcggttgagccggtgccggctgtgacgccgcgggtgacc
gcggagcctgatcgaacgcctgaggttgccaatatccccgccgttgcccagactcgtgtc
atcgatccagacaatgctgcacaagggaaggctgaagcgctgacggacaagcctgtcgag
gggcatggcgatgcggtagaggtggacgcagtggatgcgcaaagcgcaccggcaatcatt
cctgctggttcggcatcgcctgaagtaccggcgctatcttcggatccgcagccctccgcc
gatacgccttcattatctgccagttccgatgcctcgctggatgacgtgttggctgtgcct
gagtcagaacccgattccaactccgcgatgcttgccgcagcagcccaggaactcatcgat
cgcgccgctggcgagcgggtcgagaaccgggccgagaaccgggccgagaaccgggccgag
aagccggccgagaaccgggctgcgccgccagctgaaaaaatcgcgtcgccgcgtgcgacg
ggcggtgctagcgccgcgctcgatgtgttgcgcagcgcgggcatgcgggtatcgtcggat
cgcggggcgcgtgctcccgaacccgtgcgcaagcccgtagcccccaaggcgacgcctgcc
gtgcaggttcctgtgccacgtcggcctgctgcttcggccgatcgaggcacagcacccgca
gcggacgactccaggtttaatggtgctcagtccaacgcgaacggcaatgacaaaaatgcc
ggagctccgagcggcgctaacggcacgggtgccatcgccagcaggaacagcggcggcgca
acccctccgtgggaagaaatgccgctggacgactatcaaccggtttcgtcggaagacggc
tatttcatgccgcccgatgacggtttcatgccggcgttcgacagcggacccgacgacctg
cgctttaacgatgcacccgccaccaagcctgcgcccagagttgatgcgcgtccgctgccg
cccgctgtcccgctcgatgccattggcgtgagcggtgactggccaacgcttgccgtggac
ttgccgctgaagggcatcgcttaccaactcgccttcaatagcgaattgactgcgtgcgac
gacacgtccatcacgcttgccgtgcctgtcccgcaatacgccgaaagcgcacaggttgcg
aagctgaaggcggcattaaccgataagctcggccggccgatcgacgtgaacgtgagtgtc
ggccccgcacgtcgcacggccgccgcgctcgacgccgccgttcgcgcgcagcgccagcag
gaggcggagcaggagattacgcagaacccgttcgtgcagtcgctgatccgcgattttggc
gcgagtattgtgcaaggttcgatcaagccgctggcatcgggcaacgcgcaggatggcggc
cggaacgcggcatcggcgaattga
DBGET
integrated database retrieval system
