Caballeronia sp. SBC2: SBC2_22280
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Entry
SBC2_22280 CDS
T06459
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caba03016
]
SBC2_22280 (truB)
Enzymes [BR:
caba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SBC2_22280 (truB)
Transfer RNA biogenesis [BR:
caba03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SBC2_22280 (truB)
Prokaryotic type
SBC2_22280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QIE24197
LinkDB
All DBs
Position
complement(2489587..2490516)
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AA seq
309 aa
AA seq
DB search
MNGSTRPKIPRRVLDGVLLLDKPLGLSSNDALIRAKKIYLAKKAGHTGTLDPLATGLLPL
CFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGEALQTRDVTCDEAAIHAAMVHFRG
DIAQVPPMYSALKRDGKPLYEYARAGQTVEREARNVTIHALDLIACALPDVTFRVTCSKG
TYVRTLAEDMGEMLGCGAHLVALRRTGVGALTLEHAVTLDTLAEAAPDERDSWLQPVDAL
LSTFPAVHLDADATRRFCQGQRLKLSDIADVPATADRVRVYALDDQRLLGVARAGEGVLA
PERLVVSAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacggttctacccgtccgaagattccgcgtcgcgtgctcgatggtgtgttgctgctc
gacaagccgctcggactgtcgagcaacgacgcgctgattcgtgccaagaaaatctatctg
gcgaagaaggccgggcataccggcacgcttgatccgctagcgacgggtctgctgccgctg
tgtttcggtgaagcgaccaagttttcgcaggatttgctcgaagccgataaaacctacgaa
gcgaccatgcgtctcggtgtgcgcacgaccaccggggatgccgaaggcgaagcgttgcaa
acgcgtgatgtgacctgtgacgaagccgcgattcacgctgccatggttcacttccgtgga
gacatcgcgcaagttccgccgatgtattccgcgctcaaacgcgacggcaagccgttatac
gagtacgcgcgtgccgggcagacagttgagcgcgaagcgcgcaacgtgaccatccacgcg
cttgatctgatcgcgtgtgcgttgcccgatgtgacgtttcgcgtgacgtgtagcaaaggc
acttacgtgcggacgcttgctgaggatatgggtgagatgctgggatgtggcgcgcatctg
gttgcattgcgccgcaccggcgtcggcgcgttgacgctcgaacacgcggtcacgctcgac
acgcttgcagaagccgcgccagacgagcgagacagttggctgcagccggtggatgcgttg
ttgtccaccttcccggccgttcatctcgacgccgatgccacgcgtcgtttctgccaaggg
cagcggctgaagttatcggatattgcggatgtgcccgcgactgcggaccgcgttcgcgtc
tatgcactcgatgaccagcgcttgctaggcgtcgcgcgagcgggtgagggtgtgttggcg
ccggagcggctggtggtatcggcggcttga
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