Caballeronia sp. SBC2: SBC2_23820
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Entry
SBC2_23820 CDS
T06459
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBC2_23820 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_23820 (uvrB)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBC2_23820 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBC2_23820 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Mpp10
Kinesin
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIE24347
LinkDB
All DBs
Position
complement(2642637..2644730)
Genome browser
AA seq
697 aa
AA seq
DB search
MSDTPLLETAETLDESKFVRFEGSPFQLYQPYSPAGDQPTAIATLVEGIEDGLSFQTLLG
VTGSGKTFTMANVIARMGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPE
AYVPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGNPSEYHKMIL
TLRTGDKMGQRDIIARLIAMQYNRNEADFSRGTFRVRGDTIDIFPAEHAEMAVRVELFDD
EIESMQLFDPLTGRVRNKIPRFTVYPSSHYVTPRDTVMRAIETIKLELRERLEFFHKDGK
LVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDE
SHVLIGQLNGMYNGDRARKENLVDYGFRMPSALDNRPLKFNEFERKMRQAIFVSATPADY
ENRTAGQVAEQLVRPTGLVDPEIEVRPARSQVDDVLGEINARVKVHERVLVTVLTKRMAE
QLTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAI
LDADKEGFLRAERSLIQTVGRAARNVNGKAILYGDKITDSMKRAIGETERRRTKQIAHNL
AMGITPRGVTKRIKDIIDGVYNADDARAELKEAQTRAKFEDMSEKQLSKEIKRLEKQMMD
HAKNLEFEKAAQTRDQLSLLRQRVFGANVGDHITGIS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataccccgctactcgaaaccgccgaaaccctcgacgaatccaaatttgtcagg
ttcgaaggctctccgttccagctttaccaaccgtattcgcccgcgggcgaccagccgacg
gcgattgcaacgcttgtggaagggattgaggacggcctgtcgttccagacactgctcggc
gtaacgggctccggcaagacgttcaccatggcgaacgtgattgcgcgcatgggccggccg
gccattgtgttcgccccgaacaagacgctcgccgcgcagctttacgcggagtttcgcgag
ttttttccgcgcaacgccgtggagtactttgtttcttactacgattattaccagccggaa
gcctacgttccgcagcgcgacctgtttattgagaaggattcgtcgatcaacgagcacatc
gagcaaatgcggctttcggcgacaaaaagcctgcttgagcgtcgcgacgtggtgatcgtg
gcaacggtttcggcaatctacggtattggcaacccgtcggaatatcacaagatgattctg
acgctgcggaccggcgacaaaatgggccagcgcgacatcatcgcgcgtctgatcgcgatg
cagtacaaccgcaacgaagctgatttttcacgcgggacgtttcgcgtgcggggcgacacc
atcgacatcttcccggcagagcacgccgaaatggcggtgcgcgtagagctgtttgacgac
gaaatagagtcgatgcaactcttcgatccgctcaccggccgagtgcgcaacaagattccg
cgtttcaccgtgtacccatcctcccactacgtgacgccgcgcgacacggtcatgcgcgcc
atcgagacgatcaagctggagttgcgcgaacggctcgagttcttccataaggacggcaag
ctggtagaggcgcaacggctcgaacagcgcacgcgtttcgatctggaaatgctgcaggaa
ttgggcttttgcaaaggcatcgagaattattcgcggcacttttccggcgcggcgccgggc
gagccgccgccaacactcgtcgactatttgccgcccgacgcgctaatgttgctcgacgag
tcgcatgtgctgatcggccagttgaacggcatgtataacggcgaccgggcgcgcaaggag
aatctcgtcgattacggtttccgcatgccttctgcgctggataaccggccgctcaagttc
aacgaattcgaacgcaagatgcgccaggcgatcttcgtttcggccacgccagccgactac
gaaaaccgcacggcggggcaggtggccgaacagctcgtgcggccgactggactggtcgat
cccgaaattgaagtgcgtccggcgcgttcgcaagtagatgacgtgcttggcgagatcaat
gcgcgcgtcaaagtacacgagcgcgtgctggtcacagtgctgaccaagcgcatggccgaa
cagctaacggagtttctcgcggatcacggcgtgaaggtgcgctacctgcatagcgatatc
gacacggttgagcgcgttgaaatcatccgcgatctgcgtctgggcacattcgacgtgctg
gtcgggatcaatttgctgcgagaagggctggatattcccgaagtatcgctggtcgcgatc
ctcgacgccgacaaggaaggtttcctgcgcgccgagcgttcgctgatccagacggtaggt
cgggccgcccgtaacgtgaacggcaaggcgattctttacggcgacaaaataacggattcg
atgaagcgtgcgattggtgagaccgaacggcgccgcacgaagcagattgcgcacaatctc
gcgatgggtatcacgccgcgcggcgtgaccaagcggatcaaggacattatcgacggtgtc
tataacgccgacgatgcccgcgccgaactgaaggaagcgcagacccgcgcgaagttcgag
gacatgtctgaaaagcagctatcgaaggaaatcaagcggctcgaaaagcagatgatggat
cacgccaaaaatctcgaattcgaaaaagccgcgcagacccgcgaccaactgtcgcttctg
aggcagcgcgtgtttggcgccaatgtgggcgaccacattacgggcatcagctaa
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