Caballeronia sp. SBC2: SBC2_25550
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Entry
SBC2_25550 CDS
T06459
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03030
DNA replication
caba03430
Mismatch repair
caba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBC2_25550 (dnaQ)
03430 Mismatch repair
SBC2_25550 (dnaQ)
03440 Homologous recombination
SBC2_25550 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caba03032
]
SBC2_25550 (dnaQ)
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_25550 (dnaQ)
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBC2_25550 (dnaQ)
DNA replication proteins [BR:
caba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBC2_25550 (dnaQ)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBC2_25550 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QIE24512
LinkDB
All DBs
Position
2823145..2823882
Genome browser
AA seq
245 aa
AA seq
DB search
MRQLVLDTETTGLNARTGDRIIEIGCVELVNRRLTGNNLHFYVNPGRDSDPGALAVHGLT
TEFLSDKPKFADIAAELRDFVAGAELIIHNAPFDVGFMDVEFGLVGMPGVKEVCGGVIDT
LVQAKQMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESLVIDML
GETQSTGVGHAPRIALDDLQLPVLVASEEELSAHLAVLDDLDKAVKGTSVWRIETVIAVE
VAAGS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactcgtactcgataccgaaactaccggcctcaacgcccgcacgggcgaccgt
attattgaaattggctgcgtcgagcttgtgaatcgacggctcaccggcaataacctgcac
ttctacgtgaatccgggacgcgacagcgatccgggcgcgcttgcggttcacggactgacc
acggaattcctcagcgataaacccaagttcgccgatatcgctgccgagttgcgcgatttc
gtggcgggcgcggagctgatcattcacaacgcgccgttcgacgtcggtttcatggacgtg
gagttcggtctggtcggcatgcctggcgtgaaggaagtgtgcggcggtgtgatcgacaca
ctggtgcaggcgaagcagatgttccccggcaagcgcaattcactcgatgcgttgtgcgac
cggtttggtattagcaacgcgcatcggacgctgcatggcgccctgctcgactcggaattg
ctggcagaagtctatctggcgatgacgcgcggccaggaaagcctggtgatcgatatgctc
ggggaaacgcagtcaacaggcgttggtcacgcaccccgtattgcgctcgatgatttgcag
ttgccggtgctggtggcatcggaggaagaattgagcgcgcatctcgctgtcctcgatgat
ctcgacaaagcggtcaaggggacgagcgtgtggcggatcgagacggtgatcgcggttgag
gtagcggcgggttcgtga
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