Caballeronia sp. SBC2: SBC2_26320
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Entry
SBC2_26320 CDS
T06459
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03420
Nucleotide excision repair
caba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBC2_26320 (pcrA)
03430 Mismatch repair
SBC2_26320 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_26320 (pcrA)
Enzymes [BR:
caba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBC2_26320 (pcrA)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBC2_26320 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SBC2_26320 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QIE24584
LinkDB
All DBs
Position
complement(2901391..2903529)
Genome browser
AA seq
712 aa
AA seq
DB search
MLTLNSATDDDLAPKPAREEIASYLTKLNDAQREAVEYGTQASNAGDPAGALLVIAGAGS
GKTNTLAHRVAHLLVKGADPHRILLLTFSRRAASEMTRRVTRIAVNALGNRSVIAQGLTW
SGTFHSVGARLLRDYADLVGLSPSFTINDREDSADLMNLVRHELGLSAKEKRFPAKSTCF
SIYSRVVNTGASLATVLDQAFPWCREWEDDLRRLFAAYVNAKQQQSVLDYDDLLLYWSHL
AAEPSIAADLSSRFDHVLVDEYQDTNKLQASILLSMKPDGRGLTVVGDDAQSIYSFRGAT
VRNILDFPSHFNPPAKCVTLERNYRSTQPILAASNAVIGLAAERYTKNLWTDKASAQRPR
IVSVADEADQARYIVEQVLEAREGGMTLKQQAVLFRAAHHSAALEIELTRRNIPFVKFGG
LKFLDSVHVKDVLAVLRWGENPRDRVAGFRVLQLLPGVGPAIAGRVLDQVAERSDTPAAL
AGFAAPLRASEDWPALVTMMSKVCARESGWPAEFEMIRRWYEPHLERNHEDASIRHGDVL
QMESIASTYPTRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWKNVFVL
NGVDGCIPSDMGTGSDEEIDEERRLLYVAMTRAKEDLHIVTPQRFYVHNQTHMGDRHVWA
ARTRFIPAHLMPQFEACAWPLVPEPSAPTAAGLAAAAKAKVDIAARLKKMWE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcacgcttaactccgccaccgacgacgatctcgcgcccaagccggcgcgggaagaa
atcgcgtcgtacctgaccaaactgaacgacgcgcaaagggaagcggtcgagtacggcacg
caagcatcgaacgctggcgaccctgccggcgcgctgttggtgatcgcgggggcggggtcg
ggcaagacgaatacgctggcgcatcgcgtggcgcatttgctggtgaagggcgcggacccg
catcgaatacttttgctgacgttttcgcggcgcgcagccagcgagatgacccggcgcgtg
acgcgtattgcggtgaacgctttgggtaatcggagcgtgatcgcgcagggcctcacgtgg
tccgggaccttccacagcgtgggcgcgcgtttgttgcgcgattacgcggatctcgtgggg
ttgtcgccgtcgttcaccatcaacgatcgcgaggattccgccgatctcatgaacctcgtg
cggcatgaactcgggttatcggcgaaggaaaagcgctttccggccaagtccacgtgcttc
tccatctattcgcgcgtggtcaacaccggcgcttcgcttgccacggtgctcgaccaggcg
ttcccgtggtgccgcgaatgggaggacgatctgcgacggttgttcgccgcgtacgtcaac
gcgaagcagcagcaaagcgtgctcgactacgacgacttgctgctctactggtcgcatctc
gccgccgagccgtccattgccgcggatctgtcgagccgtttcgaccatgtgctcgtcgat
gaataccaggacacgaacaagctacaggcgtccatcctgctatcgatgaaacccgacggc
cgcggcctgaccgtagtcggcgacgacgcccagtccatctattcgtttcgcggcgcgacg
gtacgcaatatcctcgacttcccgagtcacttcaatccgcccgcgaaatgcgtgacgctc
gagcgcaattaccgctcgacgcagcccattctggcggcatcgaatgcggtgatcggactc
gccgccgagcgttatacgaagaacttgtggaccgacaaggcttcggcgcaacggccgcgc
attgtttcggtggctgacgaagccgatcaggcgcggtatatcgtcgagcaggtgctggag
gcgcgtgaaggcggcatgacgctgaagcagcaagcggtgctgtttcgcgccgcgcatcat
agcgccgcgctcgaaatcgaactcacgcggcgcaacattccgttcgtgaagttcggcggg
ctgaagtttctcgattccgttcacgtgaaggacgtgctcgcggtattgcgttggggtgag
aacccgcgtgatcgcgtggccggatttcgcgtgctgcagttgctgccgggagtggggccg
gcaatcgccggacgcgtgcttgatcaggtggccgagcgcagtgacacgccggctgcgtta
gccggattcgccgcgccgttgcgcgcgagtgaagactggccggcgctcgtcactatgatg
tcgaaggtttgcgcgcgcgaaagcggctggcccgccgagttcgagatgatccggcgctgg
tacgaaccccatctggagcgcaatcacgaagacgcgtccatccggcatggcgatgtgttg
cagatggaaagcatcgcgtctacttatcccacgcgcgagcgttttcttactgaactgacg
ctcgatccgcccgatgccaccagcgacgaatcgggtgttccgcttatcgatgaggattat
ctgattctctccaccatccattcggccaagggccaggagtggaagaacgtgttcgtgctg
aatggcgtggacggctgcattccgtccgatatgggcacgggcagcgacgaggaaatcgac
gaagaacggcggctgttgtacgtcgccatgacacgtgcgaaagaggatttgcacattgtc
acgccgcagcgtttctacgtgcacaaccagacgcatatgggtgaccggcatgtctgggcg
gcgcgcacgcgattcattcccgcacatctgatgccgcagttcgaagcgtgcgcgtggccg
ctggtccctgagcccagcgcgccgacggcggcggggctggccgctgcagcaaaggcgaaa
gtcgatatcgccgcgcggctcaagaagatgtgggagtga
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