Caballeronia sp. SBC2: SBC2_29250
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Entry
SBC2_29250 CDS
T06459
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBC2_29250 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caba03019
]
SBC2_29250 (groL_1)
03110 Chaperones and folding catalysts [BR:
caba03110
]
SBC2_29250 (groL_1)
03029 Mitochondrial biogenesis [BR:
caba03029
]
SBC2_29250 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caba04147
]
SBC2_29250 (groL_1)
Enzymes [BR:
caba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SBC2_29250 (groL_1)
Messenger RNA biogenesis [BR:
caba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SBC2_29250 (groL_1)
Chaperones and folding catalysts [BR:
caba03110
]
Heat shock proteins
HSP60 / Chaperonin
SBC2_29250 (groL_1)
Mitochondrial biogenesis [BR:
caba03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SBC2_29250 (groL_1)
Exosome [BR:
caba04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SBC2_29250 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
SBC2_29250 (groL_1)
Exosomal proteins of breast cancer cells
SBC2_29250 (groL_1)
Exosomal proteins of colorectal cancer cells
SBC2_29250 (groL_1)
Exosomal proteins of bladder cancer cells
SBC2_29250 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
QIE24875
LinkDB
All DBs
Position
complement(3240751..3242391)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVVFGDIARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASRTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGI
DKAVTAAIEELRKISKPCTTNKEIAQVGAISANSDSSIGDRIAEAMDKVGKEGVITVEDG
KSLEDELDVVEGMQFDRGYLSPYFINTPEKQTAILENPFVLLHDKKVSNIRDLLPILEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
IAEETGLTLEKATLAELGSAKRIEVAKENTTIIDGAGEAASIEARVKQVRTQIDEATSDY
DREKLQERVAKLAGGVAVIKVGAATEMEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RARLALKDLKGANADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNFGYNA
QTGEYVDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDCAVSELPKDDAPMGGGMPGGMG
GMGMDM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtcgtatttggcgatatcgcccgtgcaaagatggttgaaggcgtg
aacatcctggccaacgcggtcaaggtcacgctgggcccgaagggtcgcaacgtggttctg
gaacgcagcttcggcggcccgacggtcacgaaggacggtgtttcggtcgctaaagaaatc
gaactgaaagacaagctccagaacatgggcgcgcaaatggtgaaggaagttgcttcccgc
accagcgacaacgccggcgacggcacgacgacggctacggttctggcccagtcgatcgtc
cgcgaaggcatgaagtacgttgcatcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggcagtgaccgctgctattgaagaactgcgcaagatcagcaagccttgcacgaca
aacaaggaaatcgctcaagttggcgcgatttcggctaacagcgattcgtcgattggtgac
cgtattgctgaagcaatggacaaggtcggcaaggaaggcgtgatcacggttgaagacggc
aagtcgctggaagacgagctggacgtggttgaaggtatgcaattcgaccgcggctacctg
tcgccgtatttcatcaacacgccggaaaagcaaaccgcgatcctcgaaaacccgttcgtg
ctgctgcacgacaagaaggtgtcgaacattcgtgacctgctcccgatcctggagcaagtt
gcgaaggctggccgtccgctgctgatcatcgctgaagatgtggaaggcgaagctctggca
acgctggttgtgaacaacatccgcggcatcctgaagaccgttgctgtgaaggctccgggc
tttggcgatcgtcgtaaggccatgctggaagacatcgcaatcctgaccggtggtcaagtg
attgctgaagaaaccggcctgacgctggaaaaggcaacgctggctgagctgggttcggct
aagcgcatcgaagtggcgaaggaaaacaccacgatcatcgacggcgctggcgaagctgca
agcatcgaagcgcgtgtcaagcaagttcgcacgcaaatcgacgaagctacgtcggactac
gaccgcgaaaagctgcaagaacgtgtcgccaagctggctggcggcgttgcagtgatcaag
gttggcgctgcgaccgaaatggaaatgaaggaaaagaaggcacgtgttgaagacgcactg
cacgcaacgcgcgcagctgtggaagaaggcattgtggctggtggcggcgttgcgctgatc
cgcgctcgtctggcactgaaggacctgaagggcgcgaacgctgaccaggacgcaggcatc
aagatcgtgctgcgcgcaatggaagagccgcttcgccagatcgtcacgaacggtggcgaa
gaagccagcgtcgtggtggcagcagttgcagccggtacgggcaacttcggctacaacgcg
caaacgggcgagtacgtcgacctggtggaagccggtgttgtggacccgaccaaggtgacg
cgtacggcactgcaaaacgcggcatcggtggcaggtctgctgctgacgaccgactgcgct
gtgtcggaactgccgaaggacgatgctccgatgggcggcggtatgcccggcggcatgggc
ggtatgggcatggacatgtaa
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