Caballeronia sp. SBC2: SBC2_29540
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Entry
SBC2_29540 CDS
T06459
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00541
Biosynthesis of various nucleotide sugars
caba01100
Metabolic pathways
caba01250
Biosynthesis of nucleotide sugars
Module
caba_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SBC2_29540 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
caba01005
]
SBC2_29540 (kdsB)
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
SBC2_29540 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
caba01005
]
Lipid A
SBC2_29540 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DSBA
Motif
Other DBs
NCBI-ProteinID:
QIE24904
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Position
3275566..3276375
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AA seq
269 aa
AA seq
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MNAHVPVAPPFIAVVPARLASTRLPDKPLADIGGKPMVVRVAERARLSGALQVLIATDSQ
RVVEVAKEHGFEALLTRADHPNGTDRLAEVATHFGWSDDTIVVNVQGDEPLIDPALVRNV
AAHLAAHPSCAIATAAHPIHDPADVFNPNVVKVVLDSKSVALYFSRAPIPWSRDAWQKDW
PNVAALGARPSVPANVLRHIGLYAYRAKFLRVYPTLSVAPIEEAEALEQLRALWHGERIA
VLTTNDAPPPGVDTPNDLARVRALFSASA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacacgttccggtcgcgccgcccttcatcgcagtcgtccccgcgcggctcgcg
tccacgcggctgccggacaagccgctggcggatatcggcggcaagccgatggtcgtgcgc
gtggccgagcgcgcgcgtttgtcgggggcgctgcaagtgctgatcgccaccgattcgcag
cgtgtagtcgaagtggcgaaggaacatggttttgaggcgctgctcacccgcgccgatcat
ccaaacggtacggatcggctcgccgaagtcgcgacgcatttcggctggagcgacgacacc
atcgtggtcaatgtgcagggcgacgagcccttgatcgacccggcgctcgtgcgcaacgtg
gcggcgcatctggcggcgcatccgtcgtgcgcgatcgcgaccgccgcgcatcccattcat
gatccggccgatgtcttcaatcccaacgtggtgaaagtcgtgctggattcgaagagcgtc
gcgctgtatttttctcgcgcgcccattccctggtcgcgtgacgcgtggcagaaggactgg
ccgaatgtcgccgcgctcggcgcgcgtccgtccgttcccgccaacgtgttgcgccatatc
ggcctatatgcgtatcgcgcgaagttcctgcgggtttatcccaccctgtccgtggcgcct
atcgaagaagccgaggcgctcgagcaactgcgcgcgctctggcacggcgagcgcatcgca
gtgctgacgacgaacgacgcgccgccgccgggtgtcgatacccccaatgatctggcccgc
gtccgcgcgctgtttagcgcgtcggcgtaa
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