Caballeronia sp. SBC2: SBC2_31140
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Entry
SBC2_31140 CDS
T06459
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00470
D-Amino acid metabolism
caba00550
Peptidoglycan biosynthesis
caba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SBC2_31140 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SBC2_31140 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caba01011
]
SBC2_31140 (murD)
Enzymes [BR:
caba01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SBC2_31140 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
caba01011
]
Precursor biosynthesis
Amino acid ligase
SBC2_31140 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
QIE25062
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Position
complement(3435794..3437305)
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AA seq
503 aa
AA seq
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MFGEKFFDRQSPMVLVLGLGESGLAMTRWCARHGCRLRVADTRATPPNLSELAVHGIDAE
FVGGEFTPALLDGGIEIVAISPGLSPLADDLRPLLDAARERGVPVWGELELFAQALKSLG
ANGYVPKVIAITGTNGKTTTTALTGLLCERAGKTVAVAGNISPAMLDKLSEAIDNTALPD
VWVLELSSFQLETAHSFAPDAAAVLNITQDHLDWHGGLDAYAAAKGRIFGEKTVRVLNRD
DARTMALGSGNPATVVTFGLNEPKRLGDFGLLRENDIAWLAQGNDRDLSDEPAPTRRRKS
DVAAAPNVYSKRLMPVDALRVRGLHNAANALAGLALARAIDLPLASLLHGLREYKGEPHR
VEVIAQIEGIDFVDDSKGTNVGATVAALDGLAQKTVLIAGGDGKGQDFSPLAAPVARWCR
AVMLIGRDAPGIREALAETDVPLHDHATLEAATQAAALLAQPGDAVLLSPACASFDMFKN
YAHRADVFRQAVADIAAERGVML
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgagaagttcttcgatcggcaaagtccgatggtgcttgtgctggggctcggt
gaatccggcctcgcgatgacgcgctggtgcgcgcgtcacgggtgccgtctgcgcgtggcc
gatacccgcgccacgccgccgaacctgtccgaactcgcagtgcatggcatcgatgctgag
tttgtcggcggtgagttcacgccggcgctgctcgatggcggtatagagattgttgcaatc
agcccgggactgtcgcctctggctgatgatttgaggccgctcctcgacgccgcgcgggaa
cgcggcgtccctgtgtggggcgagctggaattgttcgcgcaagcgttgaagtcgcttggc
gcgaacggctatgtgccgaaggtgatcgccattacgggcaccaacggcaagaccacgacg
actgcgctcaccgggctgttgtgtgaacgtgctggcaagaccgtggcggtggcgggaaac
atcagcccggcgatgctggacaagttaagtgaagcaatcgacaacacagcgctgcccgat
gtctgggtgctggagttgtcgagttttcagcttgagacggcacactcgttcgcgccggac
gctgctgctgtgctcaacattacgcaggatcatctggactggcatggtggtctcgacgcc
tacgctgccgcgaagggccgcatctttggtgaaaagacggtgcgcgtgctgaaccgtgat
gacgctcgcacgatggcgctgggatcaggaaatcccgcgacggtcgtgaccttcggcttg
aacgagccgaagcgcctcggcgatttcggtctgctgcgcgaaaacgatatcgcatggctg
gcgcaaggcaacgaccgcgatctcagcgatgaaccagcgcctacgcgtcggcgtaaaagc
gatgtcgccgctgcgccgaacgtgtattcgaaacgcctgatgcccgtcgatgcgctgcgc
gttcgcggcctgcataacgcagcgaatgcgctggccggtttggcgctcgcaagggcgatc
gatttgccgctcgcgtccctgttgcacggcttgcgtgaatacaagggcgagccgcatcgc
gtggaagtgatcgcgcaaatagaaggcattgatttcgtcgatgacagcaagggcacgaac
gtcggcgcgacggttgcagcgctcgatggcctcgcgcaaaagaccgtgctgatcgctggt
ggcgatggcaagggccaggatttttcgccgctcgcggcgcctgtcgcgcgttggtgccgg
gcggtgatgctgattggccgcgatgcaccgggcattcgtgaggctctggccgaaacggat
gtgccgttgcatgaccacgcaacgctcgaagccgcgacgcaagcggcggcgcttctggca
caaccgggcgacgcggtattgctgtcgcctgcgtgcgccagcttcgacatgttcaagaac
tacgcacatcgcgcggacgtattccggcaagcggtggctgacattgcggcagaacgggga
gtgatgttatga
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