Caballeronia sp. SBC2: SBC2_31240
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Entry
SBC2_31240 CDS
T06459
Symbol
fadD_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00061
Fatty acid biosynthesis
caba00071
Fatty acid degradation
caba01100
Metabolic pathways
caba01212
Fatty acid metabolism
caba02024
Quorum sensing
caba04146
Peroxisome
Module
caba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SBC2_31240 (fadD_1)
00071 Fatty acid degradation
SBC2_31240 (fadD_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBC2_31240 (fadD_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBC2_31240 (fadD_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caba01004
]
SBC2_31240 (fadD_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caba04147
]
SBC2_31240 (fadD_1)
Enzymes [BR:
caba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SBC2_31240 (fadD_1)
Lipid biosynthesis proteins [BR:
caba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SBC2_31240 (fadD_1)
Exosome [BR:
caba04147
]
Exosomal proteins
Exosomal proteins of breast milk
SBC2_31240 (fadD_1)
Exosomal proteins of breast cancer cells
SBC2_31240 (fadD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
MJ1278
Allatotropin-like_C
Motif
Other DBs
NCBI-ProteinID:
QIE25072
LinkDB
All DBs
Position
complement(3447847..3449520)
Genome browser
AA seq
557 aa
AA seq
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MEKIWLKSYPAGVPDEIDATQYNSLSDLLEESFREHRSKRAFVCMGKAITYGELDTLSSR
LAAWFQSRGLKTGARVAIMMPNVLQYPVAIAAILRAGYVVVNVNPLYTPRELEHQLRDSG
AEAIVVLENFAHTVQAVVKNTAIKHVVVASMGDLMGAKGVIVNFVVRRVKKLVPAWSLPG
HVSFNAALRQGARETLKPIKQGPDDIAFLQYTGGTTGVAKGAMLLHRNLIANVLQSEVWL
EPGRKIRPDIDQFVTVVALPLYHIFALTVCGFLTLRTGGMGILIPNPRDIPGTIKELKGF
QINTFPAVNTLYNALLNNPEFAKLDFSKLIAANGGGMAVQEAVAKRWFETTGSPIIEGYG
LSETSPCVTCNPVTATEYTGTIGLPFPSTELAIRDDDNNDMPLGQPGEICIRGPQVMAGY
WNRPDETAKVMTPDGFFKSGDVGIMDERGYVKIVDRKKDMILVSGFNVYPNEIEDVVAKL
PGVFEVAAVGVKDATSGEAVKLFVVRRDPHLTEADVMAFCKERLTGYKRPRVIEFRTELP
KSNVGKILRRELRDGNA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggctgaagtcctatccggcaggcgtgcccgacgaaatcgatgcgact
cagtacaattcgctttccgacctgctggaagaaagttttcgcgaacatcgcagcaaacgc
gcgtttgtctgcatgggcaaggcgattacgtacggtgaactcgacacgctgtccagtcgg
ctagccgcgtggttccagtcgcgtggcttgaagaccggtgcgcgtgtcgcgatcatgatg
ccgaacgtattgcagtacccggtggcgattgccgccattctgcgcgcgggttatgtcgtc
gtgaacgtgaatccgctttatacgccgcgtgaactcgagcatcagttgagggattcagga
gccgaggccatcgtcgtgctcgagaacttcgcgcataccgtgcaggccgtcgtgaaaaac
acggcgatcaagcacgtcgtggtcgcgtcgatgggcgacctgatgggcgcgaaaggcgtg
atcgtcaacttcgtcgtgcggcgtgtgaagaaattggtgccggcgtggagtctccctggt
catgtgagtttcaacgcagcccttcgacaaggtgcgcgcgaaacgctcaaacccatcaag
caaggtcctgacgacatcgcttttctccagtacaccggcggtacgacaggggtcgcgaag
ggcgcgatgctgctgcatcggaacctgattgcgaatgtcttgcagtccgaagtctggctc
gaacccggacgcaagatccggccggacatcgatcaattcgtgaccgtcgtggcgttgccg
ctttatcacatcttcgcgctgaccgtttgcggcttcctgaccctgcgcactggcggcatg
ggcatcctgattccgaacccgcgcgatatcccgggcacgatcaaggagctgaaaggtttc
cagatcaacacgtttccggccgtgaacaccttgtacaacgcgctgctgaacaatccggaa
ttcgccaagctcgatttttccaagttgatcgcggcgaacggtggtggcatggctgtgcag
gaagccgtggcgaagcgatggttcgaaacaacgggttcgccgatcatcgaaggttatggg
ttatccgaaacatctccgtgcgtgacgtgcaatccggtaaccgctaccgaatacaccggc
acgatcggtttgccgttcccctccaccgaactcgccattcgcgacgacgacaacaacgac
atgccgctcggccagcccggtgagatctgcattcgcggcccacaggtgatggcaggctac
tggaaccgtcctgacgagacggcgaaagtgatgacccccgacggcttcttcaagtcgggt
gacgtaggcatcatggacgaacgcggatacgtgaagattgtggaccgcaagaaggacatg
atcctggtgtcgggcttcaacgtgtatccgaacgagatcgaggatgtagtggcgaagctt
ccgggcgtcttcgaagtggcggctgtcggcgtgaaggatgcaacctcgggcgaagcggtc
aaactgtttgtcgttcgccgcgatccgcatctgactgaagccgatgtgatggccttctgt
aaggagaggttgacgggctacaagcggccgcgcgtgatcgagttccggacggagttgccc
aagagtaatgtaggcaagatactgcgcagagagttgcgcgacggcaacgcctga
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