Caballeronia sp. SBC2: SBC2_32580
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Entry
SBC2_32580 CDS
T06459
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SBC2_32580 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caba03021
]
SBC2_32580 (rpoA)
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_32580 (rpoA)
Enzymes [BR:
caba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SBC2_32580 (rpoA)
Transcription machinery [BR:
caba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SBC2_32580 (rpoA)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SBC2_32580 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
WHD_CHMP7
Motif
Other DBs
NCBI-ProteinID:
QIE25197
LinkDB
All DBs
Position
complement(3590208..3591185)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGDSHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPDHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDSAKIIGRIVLDASFSPVLRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTEAAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaagcccaagattattgcagttgaatcgcttggcgacagtcac
gcgaaggtggtcatggagccgtttgaacgcggttatggtcacaccttgggtaatgcgctt
cggcgtgtgctgttgtcgtcgatgattggttatgcaccgaccgaagtgacgattgctggc
gtcgtgcatgaatattctacgctcgacggcgtgcaagaagatgtggtcaacctgctgttg
aatttgaagggcgtcgttttcaagctgcataaccgcgacgaagtcacggtcacgctgcgc
aaggaaggcgaaggcgttgtcacggccggcgatatcgaactcgctcacgattgcgaagtc
atcaatccggatcacgtgattgcgcatctgtcgaagggcggcaagctcgacgttcagatc
aagatcgaaaagggccgcggttatgtaccgggcaacgtgcgccgttatggcgaagattcg
gcgaagatcattggccgtatcgtgctggacgcgtcgttctcgccggttctccgcgtgagc
tacgccgttgaaagcgctcgcgtcgagcagcgtaccgatctcgacaagcttgtgatgaac
attgaaaccaacggcgtgatttcgcccgaggaagcaattcgtcaatcggctcgtatcctg
gtcgaccagttgtcggtatttgccgcactggaaggcacggaagcagcggcagaagcaccg
tcgcgcgcaccgcagatcgatccgatcctgttgcgtccggtggacgatctcgaactgacg
gttcgttccgcgaactgcctgaaggccgagaacatctattacatcggtgatttgattcag
cgcacggaaaacgaattgctcaagacgcctaatctcggtcgcaagtcgctgaacgagatc
aaggaagtcctggcttcgcgtggtctgacgttgggtatgaagctcgaaaactggccgccg
gctggtctcgacaagtaa
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