Caballeronia sp. SBC2: SBC2_36150
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Entry
SBC2_36150 CDS
T06459
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBC2_36150 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_36150 (alkA)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SBC2_36150 (alkA)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBC2_36150 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIE25545
LinkDB
All DBs
Position
complement(3976797..3977711)
Genome browser
AA seq
304 aa
AA seq
DB search
MPQTKPTRIQLPYVEPYDWPRVLRFFAGRATLGVEAVVDGSYHRAIEWLGDSGTLSVTKH
ASKPCLVATLEGAASRHAKAIGEHLTRMFDLQADAPAIAAHLGRDPWFAPLTQAVPGLRV
PGAWSGFELVVRAIVGQQVSVKAASTIVGRLVERAGTPLTDHPHPGTAWRFPTPAALAEV
DLEKIGMPGKRVAALQGFAREVAAGALPLDDPHADRAELRTALLAMPGIGPWTVEYVAMR
ALRDADAWPGTDLILMQALVARDPSMAKAAALRARAEAWRPYRAYAALHVWNEIADQAGS
AKGG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgccccaaaccaaacctacccgcatccagctgccctacgtcgaaccctatgattggccc
cgcgtcctgcgatttttcgcgggacgcgcgacgctcggcgtcgaagcagtggtggacggt
tcgtatcaccgtgcaattgagtggctcggcgattcgggcacgctcagcgtaaccaaacac
gccagcaaaccttgtctcgtcgcgacgctggaaggcgcggcgagccgccatgcgaaagcg
attggcgagcatttgacacgcatgttcgatcttcaggccgacgcgcccgccatcgccgcc
catctcggccgcgacccgtggttcgcgccgctgacacaagccgtgccggggttgcgcgta
cccggcgcgtggtccggcttcgagctggtcgtgcgcgcgatagtcggccagcaggtcagc
gtgaaagcggcatcgaccattgtggggaggctcgtcgaacgtgccggtacgccgctcacc
gatcatccgcaccccggcacggcttggcgtttcccgacacccgctgcactggccgaggtc
gatctggagaagatcggcatgccgggcaaacgcgtggccgcgttgcaggggttcgcacgc
gaggtcgcggccggcgcgctgccgctcgacgatccccatgcggaccgagccgaactgcgg
acggcgttgctggccatgccgggtatcgggccgtggacggtggaatatgtcgcgatgcgc
gcactacgcgatgccgacgcgtggcccggcaccgacctgatcctgatgcaagcgctggtg
gcacgcgatccgtcgatggcgaaagcggccgccctgcgcgcccgcgccgaggcgtggcgg
ccatatcgcgcgtatgctgcgcttcatgtgtggaacgagatcgcggaccaggcgggatcg
gcgaaaggcgggtga
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