KEGG   Caballeronia sp. SBC2: SBC2_37130
Entry
SBC2_37130        CDS       T06459                                 
Symbol
hupB_3
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
caba  Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:caba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caba03032]
    SBC2_37130 (hupB_3)
   03036 Chromosome and associated proteins [BR:caba03036]
    SBC2_37130 (hupB_3)
   03400 DNA repair and recombination proteins [BR:caba03400]
    SBC2_37130 (hupB_3)
DNA replication proteins [BR:caba03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    SBC2_37130 (hupB_3)
Chromosome and associated proteins [BR:caba03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    SBC2_37130 (hupB_3)
DNA repair and recombination proteins [BR:caba03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      SBC2_37130 (hupB_3)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-DNA_bdg DUF2267
Other DBs
NCBI-ProteinID: QIE25643
LinkDB
Position
pSBC2-1:complement(84958..85233)
AA seq 91 aa
MNKQELVDAVASATGTSKAAAAEAIDAFISTVTQAVVSGDSVQFVGFGTFSTGARAARTG
RNPKTGDTIQIAAAKTVKFTAGKAFKDLVNQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaagcaagaactcgttgacgccgtggcgtccgccaccggcacgagcaaagccgca
gccgcggaagctatcgatgcatttatctctactgtcacgcaagccgttgtcagcggcgac
agcgttcagttcgtcggtttcggcaccttcagcaccggtgcacgtgccgcgcgtacgggc
cgcaatccgaagaccggcgacaccatccagatcgctgctgcaaagacggtcaagttcacc
gccggtaaagcgttcaaagatctcgtcaatcagtaa

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