Caballeronia sp. SBC2: SBC2_40040
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Entry
SBC2_40040 CDS
T06459
Symbol
gntR_2
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_40040 (gntR_2)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SBC2_40040 (gntR_2)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QIE25934
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Position
pSBC2-1:complement(426035..427114)
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AA seq
359 aa
AA seq
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MPNDKPTAHSIDAIDAREEAPPAPVKRSRGGPKGLRITDVAAVAGVSPITVSRVFNNPES
VAPETLERVRQVVQKLGYVPNRLAGGLSSAKSRLIAAIVPTIAHSLFSETIQVFSETMSK
AGYQVLLALSGYSDSSEETLLDAVLSRRPEGVLLTGVAHTDSLRERLRNVGIPIVETWDM
TETPIDMLVGFSHYEVGVAVAERFLARGVSHPGLVSANDDRAIARITGFRERLARAGIHD
IADVIVAPPSSVSIGKVALPKLLEQMPSLDAVFCGSDLLAIGVLGEAKRRGIDVPSQLAI
CGFGDLEFASETSPQLTTVGVDGTRIGVSAARCLLERLKGAKEANVVDVGFHIVERQTV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgacaagccgaccgcccattccatcgacgccatcgacgcccgggaagaagct
ccgcccgcgcccgtcaagcgctcgcgcggcggtccgaaaggactgcgcattaccgacgtc
gcggctgttgcgggcgtctctcccatcacggtttcgcgtgtctttaacaatccggaatcg
gtcgcgccggaaacgctcgagcgcgtgcgtcaggtggtccagaagcttggttacgtacct
aaccggctcgcgggcgggttgtcctcggcgaagtcgcggctgatcgcggcgattgtcccg
accatcgcgcactcgttgttttccgagactattcaggtgttcagcgagaccatgtcgaag
gccggttatcaggtgctgctcgcgttgagcggctacagcgattccagtgaggaaacgctg
cttgatgccgtcttgagccggcgtcctgaaggggtgctgctcacgggcgtcgcgcacacg
gattcgttgcgcgaaaggctgcgcaatgtcggcattccgattgttgaaacgtgggacatg
actgagacgccgatcgatatgctcgtcggtttctcgcattacgaagtgggcgttgcggtt
gcggagcgcttcttggcgcgtggggtctcgcatccgggtctggtgtcggccaatgatgat
cgtgcgattgcgcgtatcaccggctttcgggagcggctggcgcgcgcagggatccacgat
atagcggacgtgattgtcgcgccgcccagctcggtgtccattggcaaagtcgcgttgcct
aagctgctggagcagatgccatcactcgatgcggttttctgcggctcggacttgcttgct
atcggcgtgcttggcgaggcaaaacggcggggtatcgacgtgccgtcgcaattggccatc
tgcggtttcggcgatctggagttcgcttcggaaaccagtccgcaattgacgaccgtgggc
gtggacggcacgcgtattggcgtgagcgcagcgcgctgtttgttagagcgcttgaaaggc
gcgaaggaagcgaacgtggttgatgtcgggtttcatattgtcgaacggcagacggtttaa
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