Caballeronia sp. SBC2: SBC2_41440
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Entry
SBC2_41440 CDS
T06459
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00061
Fatty acid biosynthesis
caba00071
Fatty acid degradation
caba01100
Metabolic pathways
caba01212
Fatty acid metabolism
caba02024
Quorum sensing
caba04146
Peroxisome
Module
caba_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SBC2_41440 (lcfB_2)
00071 Fatty acid degradation
SBC2_41440 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SBC2_41440 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBC2_41440 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caba01004
]
SBC2_41440 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caba04147
]
SBC2_41440 (lcfB_2)
Enzymes [BR:
caba01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SBC2_41440 (lcfB_2)
Lipid biosynthesis proteins [BR:
caba01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SBC2_41440 (lcfB_2)
Exosome [BR:
caba04147
]
Exosomal proteins
Exosomal proteins of breast milk
SBC2_41440 (lcfB_2)
Exosomal proteins of breast cancer cells
SBC2_41440 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ureidogly_lyase
Motif
Other DBs
NCBI-ProteinID:
QIE26074
LinkDB
All DBs
Position
pSBC2-1:complement(579705..581276)
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AA seq
523 aa
AA seq
DB search
MTFPTNLGALITHDEGDDRGADALAIIGLDDDFNERQYTFAEVDVLADAVACTLAAQYAR
GERIALLASNSADYVATMLGIMRAGLVAVPVNYKFPRALIADVIADSGARLVFTDSQRFA
DAPVTLPRVVFDRSEKTNDAQAFQLFIAESNARGQTFEPVVPHEKEAALFLYTSGSTGRP
KGVVLSHASHLWVVETRLKAQPLSGERMLIAAPLYHMNALALVFLALTARATTVLMPAFN
ARNYIRAIDTYRCTWLTSVPPMIAMMMQERELLARTDLSSVRYVRMGSAPVSGALLERTH
ALLPNAKVINAYGTTEGGPVVFGPHPAGLPTPAHAIGAAHRQVELRLVDTNHELASEGEL
EIRSPGLMNGYHNRPDLSTPITPDGFYRTGDVFRRDENGFYAFIGRRDDMFVSGGENIFP
GDVEKMLERHPSIQQASVIPVDDAIKGSKPVAFVVLKPGAQLSAEEVKAFALEHAPAYQH
PRQVWFVDAFPLASTNKIDRVVLKREAARRLADEGHPENAQQT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgactttcccgacaaatctcggtgcgctgataacacacgacgaaggcgacgatcggggc
gccgatgcacttgccatcatcggcctcgacgatgatttcaacgagcgccaatacaccttt
gctgaagtcgatgtgcttgccgacgcagtggcctgcacgcttgccgctcaatacgcgcga
ggcgagcgcattgcgttgctcgcgtccaattcggcggactatgtcgcgacgatgcttggc
atcatgcgcgcggggctggtcgccgtcccggtcaactataaatttccacgcgcgctgatt
gcggacgtgatcgcggatagcggggcgcgtctcgtcttcacagattcccagcgctttgcc
gatgcccccgttacgttgccgcgcgtggtgttcgatcgctcggaaaaaacaaacgacgct
caagcattccagctatttatagcggagtcgaatgcgcgagggcagaccttcgagcctgtc
gttccgcacgagaaagaagctgcgttgttcctctatacgtcgggttccacggggcggccg
aagggcgtcgtgctctcgcacgcgagtcatctctgggttgttgagacgcgcttgaaagcg
cagccactgagtggtgagcgcatgctgatcgccgcgccgctttatcacatgaatgcgctc
gcgctggtgttcctcgcgttgaccgcgcgtgccacgaccgtgttgatgccagccttcaac
gcgcgcaattacattcgcgctatcgatacttatcgctgcacgtggctcacttccgtgccg
ccgatgatcgccatgatgatgcaggagcgtgaactgctcgcgcgcacggatttgtcgtcg
gtgcgttatgtgcggatgggctcggcgccggtcagcggcgcgttgctcgagcggactcac
gcgctgctgccgaacgcgaaggtcatcaacgcgtacggcactaccgagggcgggccggtc
gtgttcggaccgcatcccgctggcttgcccacgcctgcacacgcgatcggcgcagcgcac
cgccaagtcgaacttcgtcttgtcgatacgaaccacgagcttgcgagcgaaggtgaactg
gagatccgcagcccgggcctgatgaacggttatcacaaccgcccggacctctcgacgccg
atcacgcctgacggcttttatcgcaccggcgatgtatttcgccgcgacgaaaacggcttc
tacgcgttcatcggacgacgtgacgacatgttcgtttccggtggagaaaacatctttccg
ggcgacgtggaaaagatgctcgagcgacatccttccatccagcaagcgagcgtgattccc
gtcgacgatgccatcaaggggtcaaaacccgtggcctttgtcgtgctgaaaccgggggct
caattgagcgcggaggaggtgaaggcgttcgcgctggaacacgcgccggcttatcagcat
ccgcggcaagtctggttcgtcgatgcgtttccgctcgcgtcgaccaacaagatcgaccgg
gtggttttaaagcgtgaagcagcaaggcgactggcggatgaagggcatcctgagaacgcg
caacaaacctga
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