Caballeronia sp. SBC2: SBC2_42840
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Entry
SBC2_42840 CDS
T06459
Symbol
ydcV_2
Name
(GenBank) Inner membrane ABC transporter permease protein YdcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBC2_42840 (ydcV_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_42840 (ydcV_2)
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SBC2_42840 (ydcV_2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QIE26214
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All DBs
Position
pSBC2-1:733555..734352
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AA seq
265 aa
AA seq
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MKQNGFLGLLFNALFLTFIAAPLVVVIAVSFTNKGFISMPFDGASLRWFRAILDNDQIVD
AFWLSVRLALVAATIGVALALPAALAIARYRFPGRAALTGFFLSPMMIPAVVLGIAFLRF
LSLLGLGGSFWALCATHVIIVLPYALRLALSSAIGLDRDAERAALSCGASRFTAFRRVVL
PMIRTGVAGGWVLAFIQSFDELTMTIFVATPGTTTLPVAMYNQIAQTIDPLVASVSTVLI
AGTIVLMLVLDRMVGLDRVLIGETR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacggattcctgggccttctgttcaacgcgctgttcctcacgttcatcgca
gcgccgctggtggtcgtgatcgcggtctcgttcaccaacaagggtttcatctcgatgccg
ttcgacggcgcgtcgctgcgctggttcagggctatcctggacaacgaccagatcgtcgat
gccttctggctctcggtgcgcctcgcgctggtggccgccacgattggggtagcgctcgcg
ttgccggcggcgctggctatcgcccgttatcgcttcccgggccgcgctgcgctgaccggc
tttttcctctcgcccatgatgattcccgcagtcgtgctcggtatcgcgttcctgcgattc
ctgagcttgctcgggctcggcggttcgttctgggcgctctgcgcgacgcacgtgattatc
gtgttgccctacgcgttacgactggcgttgtcatcggctattggtcttgatcgcgatgcc
gaacgcgcggcattgtcatgtggtgcgagccgctttacggcctttcgccgcgtcgtgttg
ccgatgatccgtaccggcgtggcgggcggctgggtgctggcgttcatccagagcttcgac
gaactcaccatgaccattttcgtcgcgacgcccggcacgaccacgctgcccgtcgcgatg
tacaaccagatcgcgcagacgatcgatccactggtggcctccgtgtcgactgtgttgatc
gccggcacgatcgtactgatgctggtgctcgaccggatggtgggtctggaccgcgtcctg
attggagaaacacgatga
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