Entry |
|
Name |
(GenBank) hypothetical protein
|
KO |
K09136 | ribosomal protein S12 methylthiotransferase accessory factor |
|
Organism |
caba Caballeronia sp. SBC2
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Brite |
KEGG Orthology (KO) [BR:caba00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:caba03009]
SBC2_45660
Ribosome biogenesis [BR:caba03009]
Prokaryotic type
ribosomal protein modification factors
SBC2_45660
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
pSBC2-1:1029249..1031453
|
AA seq |
734 aa
MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
NRNIPTENIRLSQNNIVDPENRYRQIFKIQVELPPDILEADRRGILRFIDRCTVKKVVQA
GPEFVIEEVENLDADAQSLLMLKPASDASTYIAGKDLPLEQTIANMSGILAALGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLNCNHFYAGAFWGED
IANEAFVHYPNERWFKPGRKDALPAEILDAYCLEIYNPDGELHGSHLYDTNSGNVQRGIC
SLPFVRQSDGEMVYFPSNLIENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPHEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNELPRPTFASEAVTEPNNFVEHFIDSSGIVSWRF
FSAKANFEFVEWDFSGQGENSNAEEAATLFGILEDMDKEVYMAVYDQLGAMACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDAGLAALLERLDNNELDEHSDIATLIGVE
FDENTEWGQLTVLELKLLINLALKQLEEAQELVGAFLQYNDNTVERGLFYQALNVVLEVL
LDEDLELDDYAVNFRRMFGDARMDAAMGSVDGSVRFYGLTPTSMKLEGLDRHHRLIDSYK
KLHKARADVAATAR |
NT seq |
2205 nt +upstreamnt +downstreamnt
atggaaatcaaagtcaactttctcgataagctgcgtcttgaagcgaagttcgacgacttc
acggtagtggccgaccagcctatccgttataagggcgatggctcggcgcctggtcctttc
gattattttctggcctcatctgccctgtgcgcagcttactttgtgaagttgtactgcgta
aatcgcaatattccgaccgaaaatatccgcctttcgcagaacaatattgttgacccggaa
aaccggtaccgacagatcttcaagattcaggttgagttgccgccagatatcctggaagca
gaccgccgtggcattttgcgctttatcgaccgctgtacggtgaaaaaagtggtgcaagcc
ggccccgagtttgtcatcgaagaggtagagaatctggatgccgacgctcagtccttactg
atgttgaagccggcttctgacgccagcacttatattgcgggcaaggatctgccgttggag
caaaccatcgccaatatgtcgggtattttggcggccttgggcatcaagattgaaatcgct
tcgtggcgcaatcttgttcccaatgtgtggtcgctgcatatccgcgatgcgcactcgccg
atgtgttttaccaatggtaaaggagcgaccaaagaaagcgcgttggcgtcggcgttggga
gagtatatcgagcgactgaactgtaaccatttctacgccggcgcgttttggggcgaagac
atcgctaacgaggcgtttgtacattacccgaacgagcgctggttcaagcctggccgtaag
gatgcgctgccggctgaaattctggatgcgtactgcctcgaaatttataatcccgacggc
gagttgcatggctcgcatttgtacgacaccaattccggcaatgtgcagcgcggtatctgt
tcgctgccttttgtgcggcagtcggacggcgaaatggtgtattttccgtccaacctgatc
gaaaacctgttcgtcagcaatggcatgagtgccggtaatacgctggccgaagctcaggtg
caatgtctgtccgaaattttcgaacgggcggtaaagcgcgaaattctggaaggtgaaatc
acattgcctgatgtgccgcacgaagtgctggcgaaatatccaggcattctggccgggatt
caggggttggaagagcagggctttccggtgctggtaaaggatgcgtcgctgggaggggtg
tacccagtgatgtgtgtcaccttgatgaacccgcgtacaggcggtgtgtttgcctcgttc
ggcgcgcatccaagcttggaggtggcgctggaacgtagtctgacggaattgctacagggc
cgcagttttgagggcctgaacgaattacctcggcctacctttgccagtgaagccgtgact
gagcccaataactttgtcgagcacttcatcgattccagcggaattgtgtcgtggcgcttt
ttcagcgctaaagcgaatttcgagtttgttgagtgggatttttctggccagggtgaaaac
tccaatgccgaggaagccgcaaccttgtttggcattcttgaagacatggacaaagaggtg
tacatggcggtgtatgaccagctgggcgccatggcctgccggattttggtgcccgggtat
tcggaagtttacccggtagaggatttgatctgggataacaccaacaaggcgctgctgttc
cgcgccgatattttgaacttgcatcgcctggacgatgccggcctggcagcattgcttgag
cggttggataacaatgaactggatgagcactccgatattgccactttgatcggcgtcgag
tttgacgagaatacggaatggggacagctaactgttctcgagttgaagctgttgattaat
ctcgctttgaagcaacttgaggaggcacaagagctggtgggagccttcctgcaatacaac
gacaacacggttgaacgcggattgttttaccaggccttgaatgtggtgctggaggtgctg
ctcgatgaagacctggaactggacgactacgcggtcaacttccgtcgcatgtttggcgac
gctcggatggacgcggcaatggggtcggtggacggcagcgtgcggttctatggtttaacg
ccaacgagtatgaaactggagggtctcgataggcaccaccgcttgatcgacagttacaaa
aaattgcataaggcgcgggccgatgtggcggccacagcgcgttag |