Caballeronia sp. SBC2: SBC2_47020
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Entry
SBC2_47020 CDS
T06459
Symbol
ydcV_3
Name
(GenBank) Inner membrane ABC transporter permease protein YdcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBC2_47020 (ydcV_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_47020 (ydcV_3)
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SBC2_47020 (ydcV_3)
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Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QIE26632
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Position
pSBC2-1:complement(1174333..1175214)
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AA seq
293 aa
AA seq
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MKVAATNIPTTPHVFTAVVLRAFDQRRLGRWLLKAAAGLSLLYILTPLIFVTWLSFCREE
IPSFPPHGYSLRWYAEIANNQQFIDGFLLSLQVGVIATAIGLAVGIPAALCIAHFRFAGR
GFLNNLLLFPLVVPGVVLGTAFYVFHVQIEIATNGNVPILGSLAGLVNGHILLVIPWTVR
LVTATLANFDRTLEEAAQNLGADRWTTFRRVTLPSILPGIVAAAMFGFVSSFSNLEISLF
LVGPGRTTLPIAILQYLEWKIDPTIAAVSVLQMLVVGAALLITDRFVKLSRVV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggcagcgaccaacattccgacgacgccgcatgtgttcactgccgtagtcctc
cgtgctttcgaccagcgccgactgggacgctggctgctgaaggcggccgcggggctgtcc
ctgttgtacattctgacgcctctcatctttgtgacgtggctctctttctgccgcgaggaa
atcccttcgttcccaccgcacggatattcactgcggtggtatgcggagattgccaacaat
cagcagttcattgacggcttcctgttgagcttgcaggtcggcgtcatcgcaaccgcgatc
ggccttgcggtgggcatcccggcagccctgtgtattgcacactttcgctttgctggtcgc
gggtttctcaacaatctgctgctgtttccgctggtggtacccggcgtggtgcttggcaca
gcgttttacgttttccatgttcagatcgagatagcgaccaacggtaacgtgccgatcctt
ggatcgctcgccggtcttgtcaacggacacatcctgctcgtcatcccatggacggtgcgc
ctggtgacagcgacgcttgccaacttcgatcgcacgctcgaggaggcggcgcagaatctc
ggcgcggataggtggacgacgtttcgccgcgtgacactgccctcgattttgccgggcatc
gtcgcggcggccatgttcggtttcgtttcttcgttcagtaatctcgagataagcctgttc
ctcgtcgggccgggtcgcacgacgctgccgatcgcgattttgcagtacctcgaatggaag
attgatccgacaatcgccgctgtctcggttctgcagatgctggtcgtcggcgcggcattg
ctgatcaccgaccgtttcgtcaaactcagccgggtggtgtga
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