Caballeronia sp. SBC2: SBC2_49730
Help
Entry
SBC2_49730 CDS
T06459
Symbol
gabD_3
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00250
Alanine, aspartate and glutamate metabolism
caba00310
Lysine degradation
caba00350
Tyrosine metabolism
caba00650
Butanoate metabolism
caba00760
Nicotinate and nicotinamide metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
Module
caba_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SBC2_49730 (gabD_3)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SBC2_49730 (gabD_3)
00310 Lysine degradation
SBC2_49730 (gabD_3)
00350 Tyrosine metabolism
SBC2_49730 (gabD_3)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SBC2_49730 (gabD_3)
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SBC2_49730 (gabD_3)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SBC2_49730 (gabD_3)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SBC2_49730 (gabD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QIE26903
LinkDB
All DBs
Position
pSBC2-1:complement(1449139..1450611)
Genome browser
AA seq
490 aa
AA seq
DB search
MTRQFELKELIRSDNFIDGQWRAAADGARFAVTDPATGTVITQVADSSPADARAATDAAA
RALPAWRDLLPKERATILHKWNALIMANQDALGALISLEQGKPLAEGRGEVAYGASYVAW
FADEATRIYGDIIPQQQRGKRMTAVKEPIGIVAAITPWNFPLAMIARKIAPALAAGCTVV
AKPAEDTPLTASALVLLAHEAGVPAGVLNLITASRDHAIATVADWLEDSRVRKITFTGST
PVGKYLARESAGTLKKLSLELGGNAPFIVFDDADLDAAVTGLLASKFRNGGQTCVCPNRV
YVQAGVYDKFAEMLSRRVAELKVAPATDPDAQIGPMINIRALDKIARHVEDALAHGARVL
AGGKRLPELGPNYYAPTVLADANHDMLLCGEETFGPVVPLFRFDDEAEAIEAANNTPFGL
ASYFYSQDVRRIDRVSRALQAGIVGINEGALSSEAAPFGGVKESGYGREGSKYGLDDYLS
IKYLCQGNLA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacacgccagttcgaactgaaggagttgatccggtcggataatttcatcgatggtcaa
tggcgcgcggccgctgacggcgcgcgcttcgccgtcaccgatccggccaccggcacggtc
atcacgcaagtcgccgacagcagccccgccgacgcccgcgccgccacggacgcagccgct
cgcgcgctgcccgcatggcgcgacttgctgccgaaagaacgcgcgacgatcctgcataaa
tggaacgcgctgatcatggcgaatcaggacgcgctcggcgcactgatctcgctggaacaa
ggcaagccgctagccgaaggccggggcgaagtggcgtatggcgcgtcgtatgtcgcctgg
ttcgccgacgaagccacgcgcatctacggcgacatcattccgcagcagcaacgcggcaag
cgcatgacggcggtgaaggaacccattggcattgtcgccgccatcacgccgtggaatttc
ccgctcgcgatgatcgcgcgcaagatcgcaccggcgctcgcggccggctgcacggtggtc
gccaagcccgctgaggacacgccgctgactgcgtcggcattggtcttgctcgcccacgaa
gccggtgtgccggcgggcgtgctgaacctcatcacggcctcgcgggatcacgcgatcgcg
accgttgcggactggcttgaagactcacgcgtacgcaagatcacgttcactggctccaca
cccgtaggcaagtatctggcgcgtgaatcggcggggacgctcaagaagttatcgttggaa
ctgggtggcaatgcaccgttcattgtcttcgatgacgccgatctcgacgccgccgtcacg
ggccttctcgcctccaagttccgcaatggcggacagacctgcgtgtgcccgaaccgcgtg
tacgtacaagcgggcgtgtacgataaattcgccgagatgctgagccgccgcgttgccgaa
ttgaaggtcgcaccggctaccgaccccgacgcgcagatcggtccgatgatcaacatccgc
gcgctcgacaagatcgcccgccacgtagaagacgcccttgcgcatggtgcgcgcgtgctc
gccggaggtaaacgccttcctgaactcggcccgaattactacgcgccgaccgtgctcgcc
gatgccaatcacgacatgctcctgtgtggcgaagaaaccttcggaccggtcgtaccgctg
ttccgtttcgacgatgaagccgaggccattgaagccgccaacaacacgccgtttggtctc
gcttcgtatttctatagccaggatgtgcgccgcatcgaccgtgtgtcgcgagcgctgcag
gctggcattgtgggcatcaacgaaggcgcactgtcgagcgaagcagcgcccttcggcggc
gtgaaagaatcgggttatggccgcgaaggatcgaagtacggcctcgatgactatctctcc
atcaagtatctctgccaggggaatctcgcatga
DBGET
integrated database retrieval system
