Caballeronia sp. SBC2: SBC2_54600
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Entry
SBC2_54600 CDS
T06459
Symbol
glyA_2
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00260
Glycine, serine and threonine metabolism
caba00460
Cyanoamino acid metabolism
caba00630
Glyoxylate and dicarboxylate metabolism
caba00670
One carbon pool by folate
caba00680
Methane metabolism
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
caba01230
Biosynthesis of amino acids
caba01240
Biosynthesis of cofactors
caba04981
Folate transport and metabolism
Module
caba_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBC2_54600 (glyA_2)
09102 Energy metabolism
00680 Methane metabolism
SBC2_54600 (glyA_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBC2_54600 (glyA_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SBC2_54600 (glyA_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SBC2_54600 (glyA_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SBC2_54600 (glyA_2)
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SBC2_54600 (glyA_2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QIE27386
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All DBs
Position
pSBC2-1:complement(1985599..1986858)
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AA seq
419 aa
AA seq
DB search
MFSAQHTIDGFDPELANAMALERQRQEDHIELIASENYASPRVLEAQGSMLTNKYAEGYP
GKRYYGGCEHVDVVESLAIERARQLFKADYANVQPHSGSQANAAVYLALLTPGDTILGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGVDTKTGLIDYDEVERLAIDHKPRMIIAGFSAYSR
VLDFARFREIADRVRAYLFVDMAHVAGLVAAGLYPNPVPFADIVTTTTHKTLRGPRGGLI
LARGNPEIEKKLSSMVFPGTQGGPLMHVIAAKAVAFKEALGPEFVDYQKQTIANAQAMVS
VFVERGYDVVSGGTDNHLFLVDLVAKGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GIRIGTPAITTRGFLKPDAVLTASLMCDVLDHPGDAQIEQRVREQVAALCARLPVYSGL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagcacaacatactattgatgggtttgatccagagcttgccaacgccatggcg
cttgagcgccagcggcaggaagatcacattgaactgatcgcctccgagaattacgccagc
ccgcgtgtgctcgaagcacaaggttctatgctgaccaacaagtacgcggagggttatccg
ggtaagcgctactacggcggttgtgagcatgtagacgttgtagagtcgctggcaatcgag
cgggccaggcagttattcaaggccgattatgccaatgtacagccgcatagcggttcgcag
gcgaacgcagcggtctatctcgcgctgctgactcccggcgacaccattctcggcatgagt
ctcgcgcatggtggtcacctgacgcatggcgcgaaggtgtcgttctcgggcaagctgtac
aacgcagtccagtacggggtcgatacaaagaccggcctgattgattacgacgaagtggag
cggcttgcgatcgaccacaagcccaggatgatcatcgcggggttctccgcatactcgcgt
gtgctcgactttgcacgctttcgtgagattgcggaccgcgtacgtgcataccttttcgtc
gatatggcgcatgtcgcgggactcgtcgcagccgggctttacccgaaccccgtaccgttc
gccgatattgtcacgaccaccacgcataagacgttacgaggcccacgcggcgggctgatt
ttggctcggggcaaccccgagatcgagaagaaacttagctcaatggtctttccaggcacc
cagggcggtccgctgatgcacgtcattgcggcgaaggccgttgcgttcaaggaagcactc
ggaccggagtttgtcgactaccagaaacagactatcgcgaacgcgcaagccatggtttcg
gtattcgttgaacgcggctatgacgttgtgtccggcggcacggacaatcacctgttcctc
gtcgatctggtcgcgaagggtctgaccggcaaggacgcagatgcagcattgggccgcgct
cacatcaccgtgaacaagaacgcggtgccaaacgatccgcaatctccattcgtgacgagc
ggcatccgaattggaacaccggccatcaccacacgtggttttcttaagcccgatgccgtg
ctgactgcctcgctgatgtgcgacgtgctggatcaccccggtgatgcccagatcgagcaa
agggtgcgcgaacaggtagcggcgttgtgtgcgcgcttgccggtgtactccggactctaa
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