Caballeronia sp. SBC2: SBC2_55220
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Entry
SBC2_55220 CDS
T06459
Symbol
glyA2
Name
(GenBank) Serine hydroxymethyltransferase 2
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00260
Glycine, serine and threonine metabolism
caba00460
Cyanoamino acid metabolism
caba00630
Glyoxylate and dicarboxylate metabolism
caba00670
One carbon pool by folate
caba00680
Methane metabolism
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
caba01230
Biosynthesis of amino acids
caba01240
Biosynthesis of cofactors
caba04981
Folate transport and metabolism
Module
caba_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBC2_55220 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
SBC2_55220 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SBC2_55220 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SBC2_55220 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SBC2_55220 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SBC2_55220 (glyA2)
Enzymes [BR:
caba01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SBC2_55220 (glyA2)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
ZapD
Motif
Other DBs
NCBI-ProteinID:
QIE27448
LinkDB
All DBs
Position
pSBC2-2:66872..68161
Genome browser
AA seq
429 aa
AA seq
DB search
MSNSSTRPAAPFFEEPLATRDAPVRSAILKELERQQSQIELIASENIVSRAVLEAQGSVL
TNKYAEGYPGKRYYGGCEFVDEIETLAIDRVKEIFNAQFANVQPHSGAQANGAVMLALTK
PGDTVLGMSLDAGGHLTHGAKPALSGKWFNAIQYGVNRETMLIDYEQIEELAMQHKPTLL
IAGFSAYPRELDFARLRAIADKAGSKLMVDMAHIAGVIAAGRHQNPVEHAHVVTSTTHKT
LRGPRGGFVLTNDEDIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALQPGFKTYIDNVL
ANAKALGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGNQVEHALERAGITCNKNGIPFD
PEKPTVTSGVRLGTPAGTTRGFGVAEFRDIGRLIVEVFDALRDHPDGHAETEHRVRSEIF
ALCERFPIY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcctcgactcgccccgccgccccgttcttcgaagaaccgcttgccacccgc
gacgcgcccgtgcgcagcgccatcctgaaagagctggaacgccagcagtcgcagatcgaa
ctgatcgcgtcggagaacattgtctcgcgcgccgttcttgaagcgcagggttcagtgctg
acgaataaatatgcggaaggttatccgggcaagcggtattacggcggctgcgaattcgtc
gatgaaatcgaaaccctcgcgatcgatcgcgtaaaggagatcttcaacgcgcagttcgcc
aacgtgcagccgcactcgggcgcgcaagcgaacggcgccgtgatgctcgcgctgacgaaa
cccggcgacaccgtgctcggcatgtcgctcgatgcaggcggtcacctgacgcatggcgct
aagccggcactttccggcaagtggttcaacgcgatccagtacggcgtgaaccgcgagacg
atgctgatcgattacgagcagatcgaagaactcgcaatgcagcacaagccgacgttgctg
atcgcggggttctcggcttatccgcgcgagctggactttgcgcgtctgcgtgccattgcg
gataaggcaggttcgaagctgatggtcgacatggcgcacattgccggtgtgatcgccgca
gggcggcatcaaaacccggtcgagcatgcgcatgtggtgacatccaccacgcacaagacg
ttgcgtggcccacgcggtggttttgtactgactaatgacgaggacatcgcgaagaagatc
aattcagcggtgttcccaggcctccagggcggcccgctgatgcatgtgatcgctggtaag
gccgtggccttcggcgaggcgctgcagcccggtttcaagacttacatcgataacgtgctg
gccaacgcgaaggcgctgggcgaagtgctgaaggcaggcggtgttgatctcgtgacgggc
ggtacggacaaccacttgctgctcgtcgatctgcgtccgaagggtttgaagggcaaccag
gtcgagcacgcgctggaacgcgccggcatcacctgcaacaagaatggaatcccgttcgat
ccggaaaagcccacggtcacctcaggcgtgcgcctcggcacgccggctggcaccacgcgc
ggttttggcgtggcagagttccgtgacatcggccgcctgattgtggaagtgttcgacgca
ctgcgcgatcacccggacggtcatgccgaaaccgaacaccgcgtgcgcagcgaaatcttc
gcgctgtgcgagcgcttccccatttattga
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