Caballeronia sp. SBC2: SBC2_55370
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Entry
SBC2_55370 CDS
T06459
Symbol
cdhR_9
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_55370 (cdhR_9)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SBC2_55370 (cdhR_9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Zn_ribbon_LapB
Motif
Other DBs
NCBI-ProteinID:
QIE27463
LinkDB
All DBs
Position
pSBC2-2:complement(85590..86573)
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AA seq
327 aa
AA seq
DB search
MPATEDFHFLLLPEFSSIGFMSAIEPLRVANRFRGALYRWHILSIDGGPVCASNGISLNA
ESALSDVDEATNVIVVAGFNPLSRYTREMADWLRRMDRKGATLGGIDTGSFVLAEAGLLK
HERVTLHWEAASAFQERYPSLTVSQELFEIDARRITCAGGTASIDLMLDLIGRRHGAELA
AQVSEQFVLGRIRQRSDHQRMQIAARYGIHNRKLIQVIGVMEQHMEEPLSPDALAEEIGV
TRRQLERLFCSAMKDTPTHFYLGLRLARARELLQQTDMSITTVCVACGFESPSHFSRTYR
TRFGSSPRQDRSSPRATTPAEDAVATS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaccgaagactttcactttctgctgctgcccgagttttcgtccatcggcttc
atgtcggcaatcgagccgctacgcgtcgccaaccgcttccggggtgcactctaccggtgg
cacatcctgagcatcgacggcggccctgtctgcgccagcaacggcatctcgctcaacgca
gaaagcgccctgagcgacgtcgacgaagccaccaacgtcatcgtcgtcgcaggcttcaac
ccgctaagccgctacacgcgcgaaatggccgactggctccggcgcatggatcgcaaaggc
gcaacactgggcggtatcgatacaggaagtttcgtgctggccgaagcgggcctcctcaag
cacgagcgcgtgacattgcactgggaagcggcatcggcgttccaggagcgctatccgtca
ctcacggtcagccaggagctattcgaaattgacgcgcgacgcatcacgtgcgcgggcggc
acggcttccatcgacctcatgctcgacctgatcggacgccgccacggcgccgaactcgcc
gcccaggtctccgagcaattcgtgctcggccgcatccggcagcgctcggaccaccagcgc
atgcagatcgcagcgcgctatggcatccacaatcgcaagctgatccaggtgatcggcgtg
atggaacaacacatggaggaacctctgtcgccagatgcactggcagaggaaatcggcgtg
acgcgacgtcagttggaacgcctgttctgctcggcgatgaaagacacacccacccacttc
tatctcggactgcgccttgcacgcgcccgcgaattactacaacaaaccgacatgtccatt
accacggtctgcgtggcatgcggcttcgaatcaccctcgcacttttcacgtacctaccgt
acgcgcttcggctcaagcccgcgccaggaccgcagttcgccacgcgcgacgacacccgct
gaggatgccgtcgcgaccagctga
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integrated database retrieval system
