Caballeronia sp. SBC2: SBC2_55930
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Entry
SBC2_55930 CDS
T06459
Name
(GenBank) RHS Repeat protein
Organism
caba
Caballeronia sp. SBC2
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
QIE27519
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All DBs
Position
pSBC2-2:145339..151218
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AA seq
1959 aa
AA seq
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MPDAASVGNFATSRSTNRIRKSVRPALINTLLSLLTLFVSTAEAGNVQFSNTTPAVVDSA
AAANTPQTQQQPSIRRGREPSKPRLLRAGQTQSGEEFAPQPNSLRALMAPVSEADAAAHD
DQVARDMPAGINGNGAIETLAKLDLKRTRAASEDVHLQNFEQSKKGLLRSSGVTGANGVV
SNDAPPGPASIDELARALRYHPDLIYQFVRNNIEIDPVRGIHKGALGAVLDNQGSAFDQA
QLMVSLLRTSGYDARFVRGVIKLSAQQFTDWYGVSSDNTCAVLNLMGQTQIPVYSINATQ
AGNCPGLKAAMTDISIEHLWVKANIGGTWYTFDPSYKPHTVKSGVDLNVAAGYNAAAFLK
NATAGATITPDLVRGLNRTGIRSDLQSAATSLATWIRKNKPTATLSDIIGGKAITPFFGG
AVRQTQNPLLDTRWNTEEWVDIPVGFKPTVRVVYQGIDQTFTSDAIYGKRLTITYNSSNQ
PVLKLEGQAIGAPGSPVAPGADSVVSFVVWHNAYTSDDSDHAFDQRIKGGGTYLIVNGWG
PTGRGLSQNYLKYLENVRAAGNADNSEPVLGASLGVMGAQWVSQTTASASITDRLANAYS
VQQHQVGIAGFDDGAYVDLPSNMSSTVQMAGDANLEKAVFDSNGMHLSILESTAVNQTSG
VSAVSTVKLLDMAQSQGQTIYNTGGGRYASLIQPALVNCQAHIGNFQNYLNQGYRLLIPG
NCQLIENRWKGVGYFVLGTGNVRLLGSTISGGLSGGKPTIPSTPAANNIQTIANSQSEQK
QTNVHGPDSQAGDPIDMVHGNFLYEHQDVKTGYGDWPDSLSFQRLYSSGMKNQSGVLGKG
WTHNYDIRLRTASDGFIGMGDRLALDAVGTIVEHKASLDLLSDPAAPAEKFLSAVVAQRW
FGDQLVDNTRIVTFGLNSEVFARLPDGSFSAPPGNGAYLDSSYGANRMMYRAVSGAYYSF
NIDKVSFYLQPDGKITTFVWSGNQLTGVKNHAGRSLTLTYANNRLQSVSSPQQTVRYAYD
GNDNLISETDPDGFATRFEYDQPGRMTKFYQAGFPSTPVVSNTYDTLDRVQTQTSAAGNL
FNYYFAGSRSEEVGPGGSSRTDYIDAEGNLLQLADPMGNWTIKDYDGQNRLVRETRPEGN
RTEYTYDDASCLRANKPAKGCTHQIATISRFPRVGTGDQVLTQRFTYDPSWETLSTATDA
KGQVTTNVYSGYSLQKVIRPAVGGVAPTTSITYESVTLPGTLPTYLYRPARVTENIDATR
STATTISYAADFTPATTTQDADGLAVKTVTTFDNEGRLITSKRDGVATVTNTYDKRGNVT
RTNANLLGGDEVIGYDADSREISRGVTVAGGAMVTCKRYNAMGDVVRVWGPAKTASVSTC
PVEVAPTPITDTTYDDHHRAFRVTRSMSAADGGNRLTEMAYNADDSVKSIRKAVGTGLEQ
SYVSYVYNPNGTVGLTTDAKGNTTVNLYDGHDRLYRTHYPLNGQPGMGDGNNYEQYTWDA
NSNLVALRKRDGQTIAQSFDSLDRLVTRTFPGAVGNVQYSYDLRGLKAGSQFSDGSHTVT
NSYDGLGQLTQTSAAGRTLRYSHDAAGNLTDIIWPDGFHVATTYDGYRRPMQMLENGTQS
LAKYTYDTLNRRTLVELGNGTRTEVVYDGLGWLANLNHRFTSSAEDWLASFTRNQLGEIK
QASVTNNRYGWTPSAASTAYASNALNQYTSAAGTAVTYDGNGNLTGDGAWTYVYDLDNRM
KTASRSGTSATLGYDPEGRLVRTTVNGTDTNLMYDGKNLAGEYNGAGQLTRRFVFGPGVD
APLVQYEGTGTAARSWLYVNQQGSIVALANVTGATTGSQAYGPFGETAGTPASRFGYTGQ
QYLAPLGLYYYKARMYSPTLGRFLQTDPVGYADDLNWYAYAGNNPINFSDPTGLAACSEK
SALTDMALGGPPKLDSSGCISTGGPSVCLAGCGNRGRLY
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgccgcatcagtaggtaattttgcgaccagtcgcagtactaatcgcatacgt
aaatcagtccgtcccgctctgatcaatactctcctgagccttctcactctgtttgtgagc
acagctgaagcgggcaacgttcagttctccaacaccacgcctgccgtcgtcgacagcgcc
gctgccgcgaatactccgcaaactcagcagcagccatcaatccgtcgcggccgcgaaccg
tccaagccgaggctattgcgggctggccagacgcagtcaggtgaggaatttgcgccgcag
ccgaatagcctcagagcactcatggcgccggtttccgaagctgacgccgcggcgcacgac
gaccaagtggcccgtgatatgccggcaggcatcaacggtaatggcgctattgaaacgctc
gcgaagctcgacctcaaacgtacgcgcgctgcatctgaagacgtgcatctgcagaacttc
gagcaatcgaagaaaggattgctccgcagttccggcgtgaccggcgctaacggtgttgtc
agcaatgacgcacctccgggacccgcgtcgatcgacgagcttgcacgtgcactgcgctac
catccggacctgatctatcaattcgttcgaaacaacattgaaatcgatcctgtgcggggc
attcataaaggtgctctcggtgcggtgcttgataaccagggcagtgccttcgaccaggcg
cagttgatggtgtcgctgttgcgcacgtcgggatacgacgcgcggtttgtgcgtggtgtg
atcaagctcagcgcgcagcagttcacggactggtacggcgtgtcgtcggacaacacgtgc
gcggtgcttaacctgatggggcagacccagatcccggtctacagtattaacgcgacccag
gcaggcaactgtccgggactgaaggccgcgatgacagacatctcgatcgagcatctgtgg
gtcaaggccaatatcggcggtacctggtacacgttcgatcccagctataagccacacaca
gtcaagtccggcgtagacttaaatgttgcggccggttataacgcggcggcgtttctaaag
aatgcgactgccggcgcaacgatcactcccgatctcgtgcgcggtctgaatcgcaccggc
atacgttcggaccttcagagcgctgccaccagcctcgcgacctggatccgcaaaaataag
ccgaccgcgaccctcagcgatatcatcggcggcaaagcgatcactccgttcttcggcggg
gccgtccgtcaaactcaaaatccgctgctggacacccgctggaataccgaggagtgggtt
gatataccggtgggtttcaagccaacggtgcgcgtggtttatcagggcattgaccagacc
ttcacgtccgacgcgatttacggcaaacgcctgacgatcacgtacaactcgtcgaaccag
cccgtgctcaaacttgaggggcaggcgatcggcgcgccgggaagcccggtcgcgcctggg
gcggacagtgtagtgagctttgtcgtgtggcacaacgcgtatactagcgacgactccgac
catgcgttcgatcagcgtatcaagggcggtggtacctacctgatcgtcaacggctgggga
ccgaccggtcgcgggctgtcacaaaactatctcaagtatctggagaacgtccgcgcggcc
ggcaatgcagataacagcgaaccagtgctcggtgcgagccttggtgtaatgggtgcgcaa
tgggtgtcgcagacgacggctagcgcttcgatcaccgatcgtctggcaaatgcgtactcg
gtccagcagcaccaggtcggcatcgcgggcttcgacgatggcgcgtacgtcgacctgcca
agcaacatgagctcgaccgtccagatggctggagacgcgaacctggaaaaggcggtgttc
gacagcaacggaatgcatttgtcgatccttgagtcgactgcagtcaatcagacctcgggt
gtgtcagcggtgtcgacggtcaagctgctcgacatggctcagagtcaagggcaaacaatc
tacaacactggcggcggtcgctacgcgagtctgatccagcccgcgctcgtcaactgtcag
gcgcatattggaaacttccagaactatctgaaccagggatatcggctactaattccgggt
aactgccagttgatagaaaaccgttggaagggtgtcggctactttgtcctcggtaccggc
aatgtgcggctgctcggctcgactatcagtggcgggctttcgggtggcaaacccacaata
cctagtaccccggccgcgaacaacattcagacaattgcgaattcacagtccgagcaaaaa
cagactaatgtccatgggccggattcgcaagctggcgacccaatcgacatggtgcatggc
aatttcctctatgaacatcaggacgtcaaaaccggctatggcgattggccggacagcttg
agcttccagcgtctttatagcagcgggatgaagaatcagagtggcgtactcggaaagggg
tggacgcacaactacgacattcggctgcgtactgcgtcagacggctttattgggatgggc
gaccggctcgcacttgatgcggtgggaactatcgttgagcataaggcgtctctcgacttg
ctgagcgatccggctgctccggcggaaaaattcctcagtgccgtggtggctcaacgctgg
ttcggggatcaactggtagacaacacccgaatcgtgacgtttggtcttaacagcgaggtg
ttcgcacgactgcccgatggcagcttcagtgcaccgcccggcaatggtgcatatctggac
agtagttatggcgccaatcggatgatgtatagggccgtcagtggagcgtactattccttc
aacatcgacaaggtcagtttctacttgcagccggatggcaagataacgactttcgtctgg
agtggaaatcaactcaccggcgtgaaaaaccatgcaggtcgcagcttgaccctgacctat
gcgaataaccgtttgcaaagcgtcagcagcccgcagcagacagtccgctatgcctacgac
ggcaacgacaatctcatcagcgagactgatccggatggcttcgccacgcgtttcgaatac
gatcaacctggacggatgacgaaattttatcaggctggctttccgagcactcccgtcgtc
agtaacacctatgacacgctcgaccgggtgcagacgcaaaccagcgccgcaggtaacctg
tttaactactacttcgccggctcgcgtagcgaagaagtgggcccgggcggatcgagtcgc
acggattacattgatgccgagggaaatctgctgcagctggcagaccctatgggcaactgg
acaatcaaggactatgacggccagaaccgcttggtccgtgagacccgtcctgaaggcaac
cgaacggaatatacgtacgacgacgctagctgcttgagagcgaacaagccggccaaaggc
tgtacgcatcagatcgcgacaatatcgcggtttccccgtgtcggcactggcgatcaagta
ctgacacagcgcttcacctatgacccgagctgggagactctgtcgacagcaacggacgcg
aaaggccaggtcactacgaatgtatattcgggttattcgttgcaaaaggtcatccggcca
gcggtaggcggcgtggcgcccacgacaagcatcacctacgagtccgtcacactcccgggt
acgctgcccacttacctctaccggccggcccgtgtcaccgaaaatattgacgctacgcga
agcaccgcaaccactataagctacgcggctgacttcacaccagcgaccacgactcaggac
gcagacggtctggcggtcaagaccgtcacgactttcgacaatgaggggcgattgatcacc
agtaagcgtgacggcgtcgcgactgtcacgaatacctacgacaagcgtggcaacgtgacc
cgcactaacgcaaacctgctcggcggcgacgaggttattggttacgacgccgacagccgc
gaaatcagccgtggcgtcacagtagccggtggcgccatggtgacgtgcaagcgttacaac
gcaatgggcgatgttgtgcgcgtctggggtccggccaaaaccgcgagtgtgagcacgtgc
ccggtcgaggtcgcgccgacgcctatcacggacacgacgtacgacgatcatcatcgcgcc
ttccgggtcacgcgttccatgagtgcggccgatggcggcaaccggctgaccgagatggcg
tacaacgcggacgacagcgtgaagagcatccggaaggcggtggggacggggcttgagcag
agctacgtgagctacgtctataacccaaacgggacggttggactgaccactgacgcaaaa
ggcaacaccacggttaacctctacgatggccacgaccggttgtaccgaacgcactatccg
ctaaacggccagccggggatgggcgacggcaataactatgagcagtacacgtgggacgca
aacagcaacttagtcgcgctaagaaagcgcgatggccagacgatcgcgcagagcttcgat
tcactggaccggttggtgacgcgcacgtttccgggcgcggtgggcaacgtgcagtacagc
tacgacttgcgcgggctgaaggctgggtcccagttcagtgacggtagccacactgtaacg
aacagctacgacggactgggccagctgacgcagacgagtgcggcagggagaacgttgcgc
tatagccatgatgcggcgggaaacctgacggacattatttggccggacggctttcacgtg
gcaactacgtacgacggctatcgtcgtccgatgcagatgctggagaacggcacacagagc
ctggcgaaatacacttatgacacgctaaaccgtcggaccttggtggagttgggcaatggc
acacgcacggaggtggtgtatgacgggctggggtggcttgcgaacctgaaccaccgtttc
acgagcagcgctgaggattggctcgcgagtttcacacgtaaccagcttggggaaatcaag
caggcgagcgtgacgaataaccggtatgggtggacgccttcggcggcgagtactgcgtat
gcgtcgaacgcgttgaaccagtacacgagtgcagcgggaacggcggtgacgtacgacggt
aatggcaacctgaccggcgacggggcgtggacatatgtctacgatctggataaccggatg
aagacggcgagccgctcgggcacgagcgcgacgcttggctatgatccggaaggccggttg
gtgcggactacggtgaatggtacggacacgaacctgatgtacgacgggaagaacctggca
ggtgagtacaacggcgcgggccagttgacgcgacgctttgtattcggcccgggagtggat
gcgccgctggtacagtacgagggtacgggtacggccgcaaggagctggctgtacgtaaac
cagcagggcagcattgtggcgttggcgaatgtgaccggcgcgacgacgggcagccaggcg
tatgggccgttcggggagactgctgggacgccggcatcgcgcttcgggtatacggggcag
cagtatttggcaccgttggggctgtactattacaaggcccggatgtactcgccgacgttg
gggaggttcctgcagacggatccggtggggtacgcggatgacctgaactggtatgcgtat
gcgggcaataacccgatcaacttcagcgatccgacagggttagcggcctgctctgaaaag
tcggcacttacggatatggcgctgggtggaccgccaaaacttgacagcagcggctgcatt
tcgacaggtgggccaagtgtttgcttagcaggctgcggaaatagaggccgactttactga
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