Caballeronia sp. SBC2: SBC2_56880
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Entry
SBC2_56880 CDS
T06459
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SBC2_56880 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_56880 (xseB)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SBC2_56880 (xseB)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SBC2_56880 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Astro_capsid_N
CCDC154
Motif
Other DBs
NCBI-ProteinID:
QIE27614
LinkDB
All DBs
Position
pSBC2-2:259199..259510
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AA seq
103 aa
AA seq
DB search
MAKTATQEGSASAENAPLPENYETALAELEGLVARMEGGALSLEESLAAYRRGAALVGFC
QQQLEKVEQQVRVLDGDTLKPLPAEVQRATQGAGTTADNGDDL
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccgcaacgcaggaaggctcggccagcgcggaaaacgcgccgctcccggag
aattacgaaacggcgctggccgaactggaggggctcgtggcgcgcatggaaggcggcgcg
ctgagccttgaagaatcgctagcggcttatcggcgcggcgcggcgctcgtcggcttttgc
cagcaacaactagagaaggtcgagcagcaagttcgcgtgctcgacggcgacacactaaaa
ccgctgcccgccgaggtccagcgcgccactcagggcgccggcacaacggcagataacggg
gacgacttatga
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