Caballeronia sp. SBC2: SBC2_60310
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Entry
SBC2_60310 CDS
T06459
Symbol
lsrC
Name
(GenBank) Autoinducer 2 import system permease protein LsrC
KO
K10560
rhamnose transport system permease protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SBC2_60310 (lsrC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_60310 (lsrC)
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SBC2_60310 (lsrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QIE27956
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All DBs
Position
pSBC2-2:619336..620376
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AA seq
346 aa
AA seq
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MTRHSPAMPAVHAPKPKRRNLLANLVRSREATLFVVLIALVAATAAVKPEFLNLQNLRDV
LLNVSIIGLLTAGMTVVMLMRHIDLSVASVVGVSAYSVGSLFVMFPHMPIAVAMLAGIGI
GLAIGAVNGTLITFGRVPSLVATLSTLYIVRGADYAWVHGGQINATSLPDAFSRIATGSL
LGLPNLVLIAVAVLFAIGVYLKQYRGGREHYAIGSNPEAARLAGIRVERRVMIGFLLSGA
IAGLAGVLWLARFGTVEASTAKGIELQVVAAAVVGSVAITGGVGTILGATLGALVLGVIN
IALVVLRVSPFWQQAIQGALIVAAITLDTLLARSVARRMMRKRDHG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacacgacattctcccgccatgcccgccgtgcacgcgcccaagcccaaacgccgcaac
ctgctggcaaacctggttcgcagccgcgaggcgacgttatttgtcgtgctgatcgcgcta
gtcgcggctaccgccgcagtgaaacccgagttcctgaatctgcagaatctgcgcgacgtg
ctgctcaatgtatcgatcatcggcttgctcacggcgggcatgaccgtcgtgatgctgatg
cggcatatcgatctctcggtggcgtccgttgtcggtgtcagcgcttattcggtcggtagt
ctcttcgtaatgttcccgcacatgccgatcgcggtcgcaatgctcgcgggcattggtatc
ggccttgcgattggcgcggtgaacggcacgctgatcacgttcgggcgcgtgccttcgctg
gtggcgactttgtcgacgctctacatagtgcgcggcgccgattacgcctgggtccacggc
ggccagatcaatgcaacgagccttccagatgcgttttctcgcattgcaacgggttcgctg
ctcggcttgccgaacctggtgctgatagcggtggccgtgctgttcgcgattggtgtctat
ctcaagcaatatcgcggcgggcgtgagcattacgcgatcgggtcgaacccggaggctgca
cggctggcaggtattcgcgtagagcgtcgcgtgatgatcggcttcctgttgtccggcgca
attgcgggtctcgcgggcgtgttgtggctggcgcgtttcggtacggttgaagcgagcacc
gcgaagggcatcgaactgcaggtggtcgccgcagccgtggtgggtagcgtggcgatcacg
ggtggcgtgggcaccatcctcggcgcgacgctcggtgccctcgtgcttggcgtgatcaac
attgcgctggtggtgttgcgcgtatcaccgttctggcagcaagccattcagggagcgctg
atcgtcgcggcgatcacgctcgacacactgctggcgcgctcggtcgcgcgtcgcatgatg
aggaaacgcgatcatggctaa
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