Caballeronia sp. SBC2: SBC2_60320
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Entry
SBC2_60320 CDS
T06459
Symbol
lsrD
Name
(GenBank) Autoinducer 2 import system permease protein LsrD
KO
K10561
rhamnose transport system permease protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SBC2_60320 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_60320 (lsrD)
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SBC2_60320 (lsrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QIE27957
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All DBs
Position
pSBC2-2:620369..621373
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AA seq
334 aa
AA seq
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MAKPDSALTMTRRRHLSWETMLVVVLVLGLILGRVLSPMFLSSANLSNMLADFTEIALIA
LPMTLIIVAAEIDLSVASVLGASSALMGVLWHMGLPMPLVIAIVLVAGTLAGLFNGLVIV
RFNLPSLAVTIGTLALFRGLAYVLLGDQAVADFPASYTAFGMDTVAAFLPMPFVLVIIGA
VVFTVLLQATPFGRSLYAIGANPVAAQFSGIDVARTKLKLFMLSGAMSALAGVVYTLRFT
SARGDNGEGFELSVIAAVLFGGVSIFGGRGSMIGVLLSLLIIGVLRNALTLSDVSSETLT
IVTGGLLLSSVLIPNLVARWRVMREKRLMTQTLS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacccgattccgcactgacgatgacccggcgccggcatctctcgtgggagacc
atgctcgtggtggtgctcgtgctgggactgatcctcgggcgcgtgttgtcgcccatgttc
ctctcgagcgccaacctctcgaacatgctcgccgacttcaccgaaatcgcgctgatcgcc
ttgccaatgacgctgatcattgtcgcggctgaaattgatttgtcggtggcgtcggtgctc
ggcgcatcgagtgcgctgatgggcgtgctctggcacatgggcctgcccatgccgcttgtg
attgcgattgtattggtcgcgggaacgcttgccggcctgttcaacgggctggtgatcgtg
cgcttcaatcttccctcgcttgccgtcaccatcggcaccctggcgttgtttcgcggcctg
gcgtacgtgctgctcggtgaccaggctgtcgcggattttcccgcgtcctatacagcgttc
gggatggatacggttgccgcgttcctgcccatgccctttgtcctggtcatcattggggct
gtcgtattcactgtgctgctgcaggctacgccgttcgggcgcagcctctacgcaataggc
gcgaatccggttgccgcgcagttttccggcattgacgtggcgcgtacgaagctcaagctt
ttcatgctgtccggcgcgatgagtgcgctcgcaggcgtggtctacacgttgcgcttcacc
agcgctcgcggcgacaacggcgagggcttcgaattgtcggtgatcgcggccgtgctgttc
ggcggcgtgagcattttcggtggacgcgggtccatgatcggcgtgcttctgtcgttgctg
atcattggcgtgttgcgcaatgcgttgacgctctctgatgtgtcgagcgagacgctgacc
attgtgaccggtggtttgttgttgtcgtcggtgctgattccgaaccttgttgcacgttgg
cgtgtcatgcgcgaaaagcgcttgatgacgcagacgctttcatga
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