Caballeronia sp. SBC2: SBC2_60330
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Entry
SBC2_60330 CDS
T06459
Symbol
lsrB_2
Name
(GenBank) Autoinducer 2-binding protein LsrB
KO
K10559
rhamnose transport system substrate-binding protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SBC2_60330 (lsrB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_60330 (lsrB_2)
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
SBC2_60330 (lsrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
ThiN
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
QIE27958
LinkDB
All DBs
Position
pSBC2-2:621454..622479
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AA seq
341 aa
AA seq
DB search
MFKPFKSIRGPALCAALIAVSAAAMIPLSANAADLKKDLKIAFLPKQINNPYEVIADDGG
LAAIKEMGGQGKVVGPSDAGASSQVQYINTLITQRQDAIVIAANDANAVVPYLKKAMAQG
IKVVTFDSDTAPDGRQIFVNQANSEAIGRGQVQLMSKLIGGEGEFAILSATPNATNQNTW
IKWMEEELKKPEYSKMKLVKIAYGNDDDQKSFVETQGLLQAYPNLKGIISPTTVGISAAA
RYVSTSPAKGKVMVTGLGTPNQMRAFIKNGTVKAFQLWDPGQLGYLAAYAAANLASGTIT
GKEGDSFDAGKLGKRTVGKSGEVVLGPPTTFDSSNIDNFNF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacccttcaagtccattcgcggtccggcgctatgcgccgcgctgatcgcggtg
tccgcggcggcgatgattccgctcagcgcgaacgccgcggatctgaaaaaagacctgaaa
atagcgttcctgcccaagcagatcaacaacccgtatgaagtgattgccgacgacggcggg
ttggcggcgatcaaggagatgggcgggcagggcaaggtagtcgggccatcggatgccggt
gcctcgtcacaggtccagtacatcaacacgctgatcacgcagcgccaggacgcgatcgtg
atcgccgccaacgacgccaacgcggttgttccgtacctgaagaaggcgatggctcagggc
atcaaggttgttactttcgactcggatacagcacccgacggccgccagattttcgtcaat
caggccaactcggaggcgatcggacgagggcaggtgcagttgatgtcgaagctcatagga
ggcgagggcgagttcgcgatcctctctgccacgccgaacgccacgaaccagaacacctgg
atcaagtggatggaggaggagctgaagaagccggaatactccaagatgaagctggtgaag
attgcctacggtaacgacgacgaccagaagtcgttcgtcgaaacgcagggtttgttgcag
gcgtatccgaacctgaagggcatcatttcccccacgaccgtgggtatatcggcggcagcc
cgttatgtttcgacttccccggccaaaggcaaggtcatggtgaccggactcggcacgccg
aaccagatgcgagcgttcatcaagaacggcacagtgaaggcattccagttgtgggatccg
ggtcaactcggttacctcgcggcgtacgcggcggctaaccttgcttcaggcacgatcacg
ggcaaggaaggcgatagcttcgacgcaggcaagctgggcaaacgcacggtcggcaagagc
ggcgaagtcgtgcttggaccgccgaccacgtttgattcttcgaatatcgacaacttcaat
ttctaa
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