Caballeronia sp. SBC2: SBC2_60600
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Entry
SBC2_60600 CDS
T06459
Symbol
cdhR_10
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_60600 (cdhR_10)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SBC2_60600 (cdhR_10)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
QIE27985
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Position
pSBC2-2:complement(653376..654410)
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AA seq
344 aa
AA seq
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MSTLSKSASQTHPAPRRVGILVLPQFSNLGLALVIEPMAIANWLSQRTLYEWTVLSIDGE
PVQATNGMIAPTRPVSNETGEFSTIFVVASFEPKKHAKNRKVKAWLRRESVFGAQIGGIE
TGTEMLAAASLLDGRPAAVHWDNLEGFQEAYPNVKATTQLYTIEPRLITCAGGSGIIDMM
LEWIGQHAGAELSAEISQHLLHARIRGTSEVQLARTDLDAAPMNEQVSEAIRLMQESVAT
PISCEDLAAAVGLSKRQLERQFKQYTATAPLRYYVSLRLATAHKLLQQTELSVSQVAAAT
GFDSLEHFSRVYKTKFGCPPSRDRSQSWEAPVMRQRVAASSAAG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgagcaaatccgcttcgcaaacacatcccgcaccacggcgcgtgggcatc
ctcgtgttgccgcagttttcgaacctcgggcttgcgctcgtgatcgagcctatggctatt
gccaactggctcagtcaacgcacgctctacgaatggaccgtgctttcaatcgatggcgaa
ccggtccaggcaaccaacggcatgatcgcgcccacacggccggtgtcgaacgagacaggc
gagttctcgaccatcttcgtggtcgcgagcttcgagcccaagaaacacgcgaagaaccgc
aaggtcaaagcgtggcttcgacgcgaaagcgtcttcggcgcgcaaattggcgggattgaa
accggcactgaaatgctcgcggctgcatcgcttctcgatggccgtccggctgctgtgcac
tgggacaacctcgaagggtttcaggaggcctatcccaacgtcaaggcaaccactcagctt
tacaccatcgagccgcgcctgatcacatgcgcgggcggcagcgggatcatcgacatgatg
ctcgagtggatcgggcagcatgcgggtgcggaattgtcggcggagatatcgcagcatctg
ctgcacgcgcgcattcgcggaaccagtgaagtccagcttgcccgaactgacctcgacgcc
gcgccaatgaacgaacaggtcagcgaggcaatccgcctgatgcaggaatccgtcgccacg
cccatctcatgtgaggatctggcggcagcggtcggcttgtcgaagagacaactcgagcgg
cagttcaagcagtacaccgccactgctccgcttcgttattacgtcagcttacggctcgcc
accgcgcataagctgttgcagcagaccgaactcagcgtgtcgcaagtcgctgccgcgacg
ggcttcgattcactcgaacatttttcgcgggtctataaaacgaagttcggctgcccgcct
agccgcgaccggtcccaatcgtgggaggccccagtgatgcggcaacgcgtagcggcgtct
tcggcagccggatga
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