Caballeronia sp. SBC2: SBC2_62270
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Entry
SBC2_62270 CDS
T06459
Name
(GenBank) Binding-protein-dependent transport system inner membrane component
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SBC2_62270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caba02000
]
SBC2_62270
Transporters [BR:
caba02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SBC2_62270
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QIE28151
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Position
pSBC2-2:complement(836818..838590)
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AA seq
590 aa
AA seq
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MTVALYVQRSPDAARKRRFAWLASGMRFLPILPTLLFLLVFFIFPVGEILQGGLFNADGS
LGFGQFQRIAHTPVYAKVLWITFSISFMTAAFSVLLGYPVAYLLSRLSARSRERWLLWIM
LPFWTSYIVKTYAWMLLLSKTGVLSTIALSLGLVKETSGTIPSLTGVLIGMVHAMLPLAV
MTMLPVMRGIDDRLAQAAETLGADRGTSFFTIFLPLSSPGVAAAGLLVFITSLGFFIVPA
LLGSPKQTMIAQLVISSVLDLFDMRFAGALSTVLLVCSIIIFFVYDRLVGLTSLTGDVPD
KRRGGRAQGAKLAMLIMFGRLAAPLVRRREGRAVTGVGPLRVYTFMVLAVLVAPILSIIP
YAFTRSDYIAFPPTLFSLKWFSTFLHSPVWQSALIRSFEVGFATALLALTLGFGATLALT
RMSSRASKPMFALLVAPLIVPRIVVAVGLLYLFARLGLTGTNTGLVVGHTVLAIPYVVVT
LAAGFRQFDWRLDDAARVMGASPLRRVTTILLPLLATSLVAAFLFAFIVSFDDLTIAIFV
SGGINSTLPKQMWDDIQLAITPTLAAVSTTLIVLIALIVFLSSYLKRDTR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgccctgtatgtacaacgttcccctgacgccgcccgcaagcgccgcttcgcg
tggctggcgagcggcatgcgcttcctgccaatcttgccaacgttgcttttcctgctggtg
ttcttcatttttcctgtcggcgaaatcctgcagggtgggcttttcaacgcggacggtagc
ttggggttcgggcagttccagcggattgctcacacgcccgtgtatgcgaaggtgctatgg
atcaccttctcgatctcgttcatgacggcagccttctcggtgctgctcggctatccggtc
gcgtacctgcttagccgcttgtccgcccgttcgcgtgaacgctggctgctgtggatcatg
ctgccgttctggaccagctatatcgtcaagacctacgcgtggatgctgctgctatcgaaa
acgggcgtgctgtccaccatcgccctttcgctcgggcttgtgaaggaaaccagcggcacg
attccctcactgacgggggtgctgatcggcatggtccacgccatgttgccgctcgccgtg
atgaccatgctgcctgtcatgcgtggtattgacgaccgcctggcgcaagctgccgaaacg
ctcggtgcggatcgcggcaccagcttcttcacgattttcctgccactgtcgtcgccgggc
gtggcggccgctggcttgctggtgttcatcacaagtcttggcttctttattgtgccggcg
ctgcttggctcgccgaaacaaacgatgatcgcgcagctcgtgatctcgtcagtgcttgat
cttttcgacatgcgctttgctggcgcgctgtcgaccgtgctgctggtctgctcgatcatt
attttctttgtctacgaccggctggtcgggctaacttcactcaccggcgatgtccccgac
aaacgccgcggcggacgcgcccagggggccaagctcgccatgctgatcatgtttggcagg
ctcgccgctccgcttgttcgtcgcagggagggccgagccgttaccggcgtgggtccattg
cgcgtctataccttcatggtgctagccgtactggttgcacccatcttgtccatcattccg
tatgcgttcactcgcagcgactacattgcatttccaccaaccctgttcagcctcaagtgg
ttctcgacgttcctgcattcgcccgtctggcaaagcgcgctgatccgttcgttcgaagtc
ggctttgcaaccgcgctgcttgcccttacgcttggtttcggcgcgactctcgcgctcacc
cgcatgtcgtcccgcgcaagcaagccgatgttcgcgttgctcgtcgcccccctgatcgtg
ccgcgcatcgtggtagcggtgggtttgctttatctgttcgcgcggctgggattgaccggc
acgaataccggcctggtcgtgggtcacaccgtattggcaatcccctatgtggtggtcacg
cttgcagcaggtttcaggcagttcgactggcgcctcgacgacgcagcgcgcgtcatggga
gcgtcgccgttgcggcgtgtcaccacaatcttgctgccgctgctcgcgacaagcctcgtg
gcggcattcctgttcgcgtttattgtttccttcgatgacctgactatcgcaatcttcgta
agcggtggcatcaacagcactctgccgaagcagatgtgggacgacatccagcttgcgatc
acgccgacgctcgcggctgtatcaaccacgctgattgtcctgattgcgttgattgttttt
ctttcctcctatctgaaacgtgacacccgttaa
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