Caballeronia sp. SBC2: SBC2_67390
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Entry
SBC2_67390 CDS
T06459
Symbol
rutR
Name
(GenBank) HTH-type transcriptional regulator RutR
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_67390 (rutR)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SBC2_67390 (rutR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QIE28663
LinkDB
All DBs
Position
pSBC2-2:1422971..1423654
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AA seq
227 aa
AA seq
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MRDDEATAEATKNDVAPVPSRRRKAHIRETNEAHLLACAEAVFAERGLEGASTAMIAERA
GLPKANLHYYFPTKLALYRRVLEDLFEDWHRAADTFESSDDPVEAIGGYVRTKMELSRRR
PLGSKVWASEIIHGAVHMQDILNERVKPWLETRVIVIDGWIARGLLAPTDAQTLMFMIWA
TTQHYADFDAQIRALKGKRALSQKGFDASTEEVVKLVIRACGAKSPE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagagatgacgaagcgacagccgaggcgacgaaaaacgatgttgcgcccgttccatcg
cggcggcgcaaggcacatattcgtgagaccaatgaagcgcatctcttagcgtgcgccgag
gctgtgttcgccgagcgcggactcgaaggcgcgagtaccgcgatgatcgcggaacgtgca
ggcttgccgaaagctaacctgcattattactttccgaccaagctggcgctttatcgacgc
gtgcttgaggatttgttcgaagactggcatcgtgcggcggacaccttcgagtccagcgat
gacccggtcgaagcaattggcggctacgtgcgtacgaaaatggaattgtcgaggcggcgt
ccgctcggctcgaaggtgtgggcaagcgagatcattcacggcgcggtccacatgcaggac
atcttgaacgagcgcgtcaagccgtggcttgaaacgcgagtgatcgtgatcgatggatgg
attgcccgaggtttgctcgctcccaccgacgcgcagacgctgatgttcatgatctgggcc
acgacgcagcactacgcagattttgatgcccagatccgggcgctgaaaggcaaacgcgcg
ctttcacagaagggctttgatgcgtccacggaggaagtggtcaagctcgtgattcgtgca
tgtggagcgaagtcaccggagtga
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