Caballeronia sp. SBC2: SBC2_69390
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Entry
SBC2_69390 CDS
T06459
Symbol
tsaR_6
Name
(GenBank) HTH-type transcriptional regulator TsaR
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_69390 (tsaR_6)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SBC2_69390 (tsaR_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QIE28863
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All DBs
Position
pSBC2-2:1638514..1639431
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AA seq
305 aa
AA seq
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MTLIQLRVFCAVVEQGSFRAAARALDIGQSTLTQAIQSLEAELGVTLLNRSHQGISVTSL
GETFLIRANAIIRDCQRAMQDMQQSSGEPEGQIALGVTSEPLSESLLPVLKRFIARFPRV
HVHVTSGYTKMLIEKIRDGRLDFALCPLAPQVSDVDLDIERLYRSVPGVIARKGHPQARA
TSVRDLKDCEWVSIRPAGIVGGAENRLTSLFRAEELGEPRIVITAESLLETLHIVCESDY
LTIEPRVLVELKLFSNSIVNIPIREAFDPRDVCLISRRSSPLTMVAQELASMLVSYSRLL
HGAGS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgatccagctccgggtgttctgcgcggttgtggagcaaggcagcttccgtgct
gcggcaagggcgctcgacattgggcaaagcacgctgacgcaagcaatccagagccttgag
gccgagcttggcgtgacgctgctgaaccgctcgcatcagggtatcagcgtgaccagcctg
ggcgagaccttcctcattcgcgcgaacgcgatcattcgcgattgccaacgcgcgatgcag
gacatgcagcagtcgtcgggcgaacccgaagggcaaatcgcgctcggcgttacgtccgaa
ccgctgtcagaatccctgctgcctgtactcaagcgctttatcgcccgctttccgcgcgta
cacgtgcatgtgaccagcggctatacgaagatgctgatcgagaagatccgcgacggccgg
ctcgacttcgcgctgtgtccgctcgcgccgcaagtcagcgacgtcgatctcgacatagaa
cgcctctaccggtcggtgccaggcgtgatcgcgcgcaagggtcacccccaggcgcgtgcc
acgtccgttcgcgatctgaaggattgcgagtgggtcagcatccggcctgcgggaattgtt
ggcggggcggagaaccgcctgaccagcctctttcgtgcagaggaactgggggagcccagg
atcgttatcacggcggagtcgctgctagagacgctgcacattgtgtgcgaatccgattac
ctgaccatcgagccgcgcgtgctggtcgagttgaagctgttctcgaattcgatcgtcaac
ataccgattcgtgaagcattcgatccacgcgatgtctgtctcatcagccgacggtcttcg
ccgttgaccatggtcgcacaggaactcgcaagcatgctggtgtcctattcacgcctgctg
catggcgccggatcgtga
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