Caballeronia sp. SBC2: SBC2_79830
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Entry
SBC2_79830 CDS
T06459
Symbol
sctC_4
Name
(GenBank) Type 3 secretion system secretin
KO
K02280
pilus assembly protein CpaC
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBC2_79830 (sctC_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
caba02044
]
SBC2_79830 (sctC_4)
02035 Bacterial motility proteins [BR:
caba02035
]
SBC2_79830 (sctC_4)
Secretion system [BR:
caba02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
SBC2_79830 (sctC_4)
Bacterial motility proteins [BR:
caba02035
]
Pilus system
Pilus assembly proteins
SBC2_79830 (sctC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
HTH_62
Motif
Other DBs
NCBI-ProteinID:
QIE29907
LinkDB
All DBs
Position
pSBC2-4:complement(83101..84552)
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AA seq
483 aa
AA seq
DB search
MKMQFGPICRATWALAGALCVAPVLAAPLKAMPVRDPNGSQPVPSAYAAGPLEINAGAGV
LVRLNEDATSVFVADPAVADVHVPSPRAVFVLGKKSGTTTLYVLGANNKTLLQRTVSVAR
DMDGLRRTIAARFPNMNVQISGGQGSLQLSGQAANAADADAVVQAVTPYLADKEVLINRM
TIDRPLQVQLRVRITEVDRNVTQQLGINWQSLGNVAGNFFGGIYSGRAIYNLNQPITNGT
STVYPVNLPTNNAYSIFGAFSTGRTSIQALVDALNQEGLLTVLAEPNLVALSGQTASFIA
GGEFPIPVSQINGAISVEFKQFGVKLDFTPTVLADNRISLKVRPEVSEIDTSVSVTTGGI
TVPGLSLRRADTTVELGSGQSFAIAGLLQSTTNDLISQVPGVGSIPILGKLFQSTNYQNN
KTELVIMVTPYIVEPTDPAKLRTPLESLVSPSNDVEYSFSHQAGDTASTAGQPRLVGAAG
YVY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcagttcggtccgatttgccgcgccacctgggcgctcgctggcgccttgtgc
gtagcaccggtactcgcggcgcctctgaaagccatgccggttcgcgaccccaatgggtcg
caaccggtaccgtcggcatatgcagcgggtccgctcgaaatcaacgcaggcgcgggcgtg
ctggtgcgactcaatgaagatgcgacttccgtgttcgtcgccgacccagccgtggccgac
gtgcacgtgccctcgccgcgagcggtattcgtgctcggtaaaaagagtggtaccacgact
ctctacgtgctgggtgcgaacaacaagacgctcctgcagcgcaccgtctccgtcgcccgc
gacatggacgggttgcgcaggacgatcgccgcacgctttcccaacatgaacgtgcagatc
agcggcggccagggctcattgcaactgtccggccaggccgccaacgccgccgatgcagac
gctgtcgtgcaggccgtcacgccctatctggccgacaaggaagtgttgatcaaccgcatg
acgatcgaccggccgttgcaggtgcaattgcgtgtgcggatcacggaagtggaccgcaac
gtcacgcagcagctaggcattaactggcagtcgctcggcaatgtggccggcaattttttc
ggcggcatctacagcggccgcgcaatctacaacctgaaccagccgatcacgaacggaacc
tccaccgtgtatccggtgaaccttccgaccaacaatgcgtattccatcttcggcgcgttc
agtaccggccgcaccagtatccaggccctcgtcgacgcgttgaaccaggagggactcctt
accgtactcgccgagccgaacctcgtagcgctttccggccagacggcaagctttatcgct
ggcggtgagtttccgattcccgtgtcgcagatcaatggcgcgatctcggttgaattcaag
cagttcggcgtaaaactcgacttcacgccgaccgtgcttgccgacaaccgcatcagcctc
aaggtgcgtccggaagtgagcgagatcgatacctcggtaagcgtcacgaccgggggcatc
acagtgccgggcttgagtctgcgccgcgcggacacgacagtcgaactgggcagcggccag
agtttcgcgattgcgggcctgctgcaaagcacgacgaacgacctgatttcccaagtcccg
ggcgtgggctcgatccccatcctcggcaagctgttccagtcgacgaattaccagaacaac
aagaccgaactggtcatcatggtgacaccgtatattgtcgagccgaccgatccggcgaag
ctgcgcacgccgctcgagtcactcgtttcaccgagcaacgacgtcgaatatagcttcagc
catcaggccggcgacacagcgtcgacggcaggacaaccacgtctagtcggcgcggccgga
tacgtttattga
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